Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HACD3Q9P035 STRCP1-201ENST00000509801 5328 ntBASIC14.39□□□□□ -0.11
HACD3Q9P035 RN7SKP214-201ENST00000364208 315 ntBASIC14.39□□□□□ -0.11
HACD3Q9P035 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HACD3Q9P035 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.39□□□□□ -0.11
HACD3Q9P035 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.39□□□□□ -0.11
HACD3Q9P035 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.39□□□□□ -0.11
HACD3Q9P035 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.39□□□□□ -0.11
HACD3Q9P035 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.39□□□□□ -0.11
HACD3Q9P035 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.39□□□□□ -0.11
HACD3Q9P035 EIF4HP1-201ENST00000453115 687 ntBASIC14.39□□□□□ -0.11
HACD3Q9P035 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HACD3Q9P035 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HACD3Q9P035 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HACD3Q9P035 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HACD3Q9P035 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.39□□□□□ -0.11
HACD3Q9P035 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.39□□□□□ -0.11
HACD3Q9P035 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.39□□□□□ -0.11
HACD3Q9P035 BAP1-211ENST00000615113 489 ntBASIC14.39□□□□□ -0.11
HACD3Q9P035 AC100757.4-201ENST00000626934 759 ntBASIC14.39□□□□□ -0.11
HACD3Q9P035 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HACD3Q9P035 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HACD3Q9P035 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
HACD3Q9P035 AC118758.2-201ENST00000614242 2813 ntBASIC14.39□□□□□ -0.11
HACD3Q9P035 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HACD3Q9P035 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HACD3Q9P035 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.39□□□□□ -0.11
HACD3Q9P035 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.39□□□□□ -0.11
HACD3Q9P035 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HACD3Q9P035 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HACD3Q9P035 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HACD3Q9P035 AC015909.5-201ENST00000624336 2266 ntBASIC14.39□□□□□ -0.11
HACD3Q9P035 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HACD3Q9P035 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HACD3Q9P035 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
HACD3Q9P035 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HACD3Q9P035 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HACD3Q9P035 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HACD3Q9P035 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC14.38□□□□□ -0.11
HACD3Q9P035 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.38□□□□□ -0.11
HACD3Q9P035 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.38□□□□□ -0.11
HACD3Q9P035 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.38□□□□□ -0.11
HACD3Q9P035 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
HACD3Q9P035 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.38□□□□□ -0.11
HACD3Q9P035 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.38□□□□□ -0.11
HACD3Q9P035 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.38□□□□□ -0.11
HACD3Q9P035 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
HACD3Q9P035 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
HACD3Q9P035 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.38□□□□□ -0.11
HACD3Q9P035 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.38□□□□□ -0.11
HACD3Q9P035 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
HACD3Q9P035 HMGA1P1-201ENST00000415560 1062 ntBASIC14.38□□□□□ -0.11
HACD3Q9P035 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.38□□□□□ -0.11
HACD3Q9P035 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.38□□□□□ -0.11
HACD3Q9P035 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.38□□□□□ -0.11
HACD3Q9P035 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.38□□□□□ -0.11
HACD3Q9P035 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.38□□□□□ -0.11
HACD3Q9P035 AC020914.3-201ENST00000594712 304 ntBASIC14.38□□□□□ -0.11
HACD3Q9P035 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.38□□□□□ -0.11
HACD3Q9P035 AC243960.2-201ENST00000600996 747 ntBASIC14.38□□□□□ -0.11
HACD3Q9P035 AL451050.2-201ENST00000606967 682 ntBASIC14.38□□□□□ -0.11
HACD3Q9P035 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.38□□□□□ -0.11
HACD3Q9P035 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.38□□□□□ -0.11
HACD3Q9P035 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HACD3Q9P035 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
HACD3Q9P035 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.38□□□□□ -0.11
HACD3Q9P035 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HACD3Q9P035 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HACD3Q9P035 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.38□□□□□ -0.11
HACD3Q9P035 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HACD3Q9P035 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.38□□□□□ -0.11
HACD3Q9P035 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 SHMT1P1-201ENST00000419974 1312 ntBASIC14.38□□□□□ -0.11
HACD3Q9P035 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.38□□□□□ -0.11
HACD3Q9P035 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HACD3Q9P035 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
HACD3Q9P035 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HACD3Q9P035 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.37□□□□□ -0.11
HACD3Q9P035 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms