Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 MIR3188-201ENST00000583494 85 ntBASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 AL022334.2-201ENST00000610000 484 ntBASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CUEDC1Q9NWM3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 AC007952.5-201ENST00000572818 1486 ntBASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 AC006480.2-201ENST00000609770 1337 ntBASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 RPS9P1-201ENST00000419943 583 ntBASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 AL596276.2-201ENST00000447525 331 ntBASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 RN7SL11P-201ENST00000471305 293 ntBASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 AC090857.1-201ENST00000527400 390 ntBASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 PRKXP1-201ENST00000561423 1122 ntBASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 FGFR3P5-201ENST00000564496 886 ntBASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 ADAM3B-201ENST00000569937 840 ntBASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 MEG3_2.1-201ENST00000611456 105 ntBASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 HLA-C-210ENST00000640219 976 ntBASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 BRD7P5-201ENST00000299197 1822 ntBASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 AC015909.3-201ENST00000572855 1794 ntBASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.76□□□□□ -0.21
CUEDC1Q9NWM3 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CUEDC1Q9NWM3 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms