Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 HNRNPA3P12-201ENST00000437410 1063 ntBASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 RPSAP70-201ENST00000504462 864 ntBASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 RNA5SP420-201ENST00000516997 137 ntBASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 RN7SL602P-201ENST00000578326 324 ntBASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 RN7SL718P-201ENST00000581254 303 ntBASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 NEK4P3-201ENST00000604859 544 ntBASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 AC004686.1-201ENST00000605113 538 ntBASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 KRT8P38-201ENST00000441370 1430 ntBASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CRAMP1Q96RY5 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 GOLGA8EP-201ENST00000530246 1959 ntBASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 CTSL-202ENST00000342020 933 ntTSL 2 BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 HNRNPA1P42-201ENST00000458678 957 ntBASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 RPL29P2-201ENST00000488409 460 ntBASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 IGHEP1-201ENST00000521393 651 ntBASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 PHBP18-201ENST00000546648 813 ntBASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 AF013593.1-201ENST00000458074 1487 ntBASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 KRT8P25-201ENST00000473150 1456 ntBASIC16.93■□□□□ 0.3
CRAMP1Q96RY5 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CRAMP1Q96RY5 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC16.92■□□□□ 0.3
CRAMP1Q96RY5 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CRAMP1Q96RY5 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CRAMP1Q96RY5 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CRAMP1Q96RY5 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CRAMP1Q96RY5 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CRAMP1Q96RY5 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CRAMP1Q96RY5 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC16.92■□□□□ 0.3
CRAMP1Q96RY5 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CRAMP1Q96RY5 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC16.92■□□□□ 0.3
CRAMP1Q96RY5 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CRAMP1Q96RY5 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC16.92■□□□□ 0.3
CRAMP1Q96RY5 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC16.92■□□□□ 0.3
CRAMP1Q96RY5 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CRAMP1Q96RY5 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC16.92■□□□□ 0.3
CRAMP1Q96RY5 RN7SL524P-201ENST00000581152 300 ntBASIC16.92■□□□□ 0.3
CRAMP1Q96RY5 AC132812.1-201ENST00000583145 892 ntBASIC16.92■□□□□ 0.3
CRAMP1Q96RY5 AC016582.2-202ENST00000587765 1094 ntBASIC16.92■□□□□ 0.3
CRAMP1Q96RY5 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CRAMP1Q96RY5 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC16.92■□□□□ 0.3
CRAMP1Q96RY5 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC16.92■□□□□ 0.3
CRAMP1Q96RY5 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms