Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDKL3Q8IVW4 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 AC020658.7-201ENST00000624274 2442 ntBASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 AL365181.3-201ENST00000605886 3222 ntBASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 TSPY25P-201ENST00000429463 745 ntBASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 AC011742.3-201ENST00000439053 820 ntBASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 AL591846.1-201ENST00000451736 433 ntBASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 RN7SL277P-201ENST00000481521 288 ntBASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 SNORD3B-2-202ENST00000571722 791 ntBASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDKL3Q8IVW4 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 EIF4HP1-201ENST00000453115 687 ntBASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 AC104073.2-201ENST00000453737 312 ntBASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 AC009779.1-201ENST00000551138 283 ntBASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 AL132994.2-201ENST00000603120 687 ntBASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 AL157813.1-201ENST00000612996 587 ntBASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 AC025183.3-201ENST00000623526 1482 ntBASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.54□□□□□ -0.08
CDKL3Q8IVW4 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms