Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF135Q8IUD6 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC15.06■□□□□ 0
RNF135Q8IUD6 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC15.06■□□□□ 0
RNF135Q8IUD6 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF135Q8IUD6 SURF4-203ENST00000371991 715 ntTSL 3 BASIC15.06■□□□□ 0
RNF135Q8IUD6 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
RNF135Q8IUD6 NME4-203ENST00000397722 1232 ntTSL 2 BASIC15.06■□□□□ 0
RNF135Q8IUD6 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC15.06■□□□□ 0
RNF135Q8IUD6 OR51A9P-201ENST00000422578 911 ntBASIC15.06■□□□□ 0
RNF135Q8IUD6 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC15.06■□□□□ 0
RNF135Q8IUD6 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.06■□□□□ 0
RNF135Q8IUD6 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC15.06■□□□□ 0
RNF135Q8IUD6 ERP29P1-201ENST00000442902 706 ntBASIC15.06■□□□□ 0
RNF135Q8IUD6 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.06■□□□□ 0
RNF135Q8IUD6 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RNF135Q8IUD6 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF135Q8IUD6 GCOM2-201ENST00000509133 1104 ntBASIC15.06■□□□□ 0
RNF135Q8IUD6 AC131206.1-201ENST00000538078 1211 ntBASIC15.06■□□□□ 0
RNF135Q8IUD6 AC068867.1-201ENST00000559855 150 ntBASIC15.06■□□□□ 0
RNF135Q8IUD6 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
RNF135Q8IUD6 AC010632.2-201ENST00000588369 1224 ntBASIC15.06■□□□□ 0
RNF135Q8IUD6 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC15.06■□□□□ 0
RNF135Q8IUD6 AL022334.2-201ENST00000610000 484 ntBASIC15.06■□□□□ 0
RNF135Q8IUD6 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.06■□□□□ 0
RNF135Q8IUD6 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
RNF135Q8IUD6 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RNF135Q8IUD6 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF135Q8IUD6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF135Q8IUD6 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.06■□□□□ 0
RNF135Q8IUD6 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.06■□□□□ 0
RNF135Q8IUD6 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.06■□□□□ 0
RNF135Q8IUD6 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.06■□□□□ 0
RNF135Q8IUD6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
RNF135Q8IUD6 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
RNF135Q8IUD6 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.05■□□□□ 0
RNF135Q8IUD6 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RNF135Q8IUD6 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
RNF135Q8IUD6 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RNF135Q8IUD6 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.05■□□□□ 0
RNF135Q8IUD6 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.05■□□□□ 0
RNF135Q8IUD6 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
RNF135Q8IUD6 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.05■□□□□ 0
RNF135Q8IUD6 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNF135Q8IUD6 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNF135Q8IUD6 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNF135Q8IUD6 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNF135Q8IUD6 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC15.05■□□□□ -0
RNF135Q8IUD6 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC15.05■□□□□ -0
RNF135Q8IUD6 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC15.05■□□□□ -0
RNF135Q8IUD6 PPIA-208ENST00000489459 907 ntTSL 2 BASIC15.05■□□□□ -0
RNF135Q8IUD6 CISD2-202ENST00000503643 808 ntTSL 2 BASIC15.05■□□□□ -0
RNF135Q8IUD6 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC15.05■□□□□ -0
RNF135Q8IUD6 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.05■□□□□ -0
RNF135Q8IUD6 IGHEP1-201ENST00000521393 651 ntBASIC15.05■□□□□ -0
RNF135Q8IUD6 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
RNF135Q8IUD6 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC15.05■□□□□ -0
RNF135Q8IUD6 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC15.05■□□□□ -0
RNF135Q8IUD6 MIR2392-201ENST00000584881 84 ntBASIC15.05■□□□□ -0
RNF135Q8IUD6 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC15.05■□□□□ -0
RNF135Q8IUD6 RPS5-204ENST00000598098 536 ntTSL 2 BASIC15.05■□□□□ -0
RNF135Q8IUD6 PPIA-210ENST00000620047 827 ntTSL 5 BASIC15.05■□□□□ -0
RNF135Q8IUD6 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.05■□□□□ -0
RNF135Q8IUD6 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC15.05■□□□□ -0
RNF135Q8IUD6 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNF135Q8IUD6 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RNF135Q8IUD6 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNF135Q8IUD6 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
RNF135Q8IUD6 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.05■□□□□ -0
RNF135Q8IUD6 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
RNF135Q8IUD6 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.05■□□□□ -0
RNF135Q8IUD6 AC113367.3-201ENST00000508316 1912 ntBASIC15.05■□□□□ -0
RNF135Q8IUD6 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNF135Q8IUD6 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNF135Q8IUD6 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNF135Q8IUD6 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNF135Q8IUD6 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNF135Q8IUD6 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNF135Q8IUD6 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RNF135Q8IUD6 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.05■□□□□ -0
RNF135Q8IUD6 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RNF135Q8IUD6 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.05■□□□□ -0
RNF135Q8IUD6 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
RNF135Q8IUD6 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
RNF135Q8IUD6 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNF135Q8IUD6 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RNF135Q8IUD6 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.05■□□□□ -0
RNF135Q8IUD6 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.04■□□□□ -0
RNF135Q8IUD6 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF135Q8IUD6 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF135Q8IUD6 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.04■□□□□ -0
RNF135Q8IUD6 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF135Q8IUD6 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.04■□□□□ -0
RNF135Q8IUD6 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF135Q8IUD6 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
RNF135Q8IUD6 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF135Q8IUD6 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF135Q8IUD6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
RNF135Q8IUD6 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF135Q8IUD6 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.04■□□□□ -0
RNF135Q8IUD6 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms