Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 CCT8L1P-201ENST00000465400 1674 ntBASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 USP17L6P-201ENST00000382470 1197 ntBASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 RN7SL720P-201ENST00000488178 304 ntBASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TTC39BQ5VTQ0 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TTC39BQ5VTQ0 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TTC39BQ5VTQ0 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TTC39BQ5VTQ0 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
TTC39BQ5VTQ0 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.77□□□□□ -0.04
TTC39BQ5VTQ0 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TTC39BQ5VTQ0 AL359183.1-201ENST00000623796 2132 ntBASIC14.77□□□□□ -0.04
TTC39BQ5VTQ0 CICP8-201ENST00000455800 2813 ntBASIC14.77□□□□□ -0.04
TTC39BQ5VTQ0 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
TTC39BQ5VTQ0 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TTC39BQ5VTQ0 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TTC39BQ5VTQ0 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TTC39BQ5VTQ0 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TTC39BQ5VTQ0 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 AC073150.1-201ENST00000450406 1084 ntBASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 RN7SL574P-201ENST00000581512 297 ntBASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 AL021578.1-201ENST00000613646 709 ntBASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 LINC01783-202ENST00000614408 828 ntBASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 MIR6769A-201ENST00000617340 73 ntBASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 BX284668.2-205ENST00000619677 828 ntBASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 AC015909.5-201ENST00000624336 2266 ntBASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TTC39BQ5VTQ0 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.76□□□□□ -0.05
TTC39BQ5VTQ0 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms