Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.38■□□□□ 0.37
RC3H1Q5TC82 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 FMO6P-201ENST00000236166 1620 ntBASIC17.37■□□□□ 0.37
RC3H1Q5TC82 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 AP001267.2-201ENST00000532619 2086 ntBASIC17.37■□□□□ 0.37
RC3H1Q5TC82 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 SNRPD2P2-201ENST00000473818 333 ntBASIC17.37■□□□□ 0.37
RC3H1Q5TC82 ISL1-203ENST00000511384 981 ntTSL 5 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 RN7SL162P-201ENST00000579233 292 ntBASIC17.37■□□□□ 0.37
RC3H1Q5TC82 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 DBET-201ENST00000630918 3363 ntBASIC17.37■□□□□ 0.37
RC3H1Q5TC82 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC17.37■□□□□ 0.37
RC3H1Q5TC82 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 RPSAP6-201ENST00000417882 882 ntBASIC17.36■□□□□ 0.37
RC3H1Q5TC82 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 HNRNPA1P25-201ENST00000422644 937 ntBASIC17.36■□□□□ 0.37
RC3H1Q5TC82 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 AC004466.2-201ENST00000614749 516 ntBASIC17.36■□□□□ 0.37
RC3H1Q5TC82 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 GOLGA8EP-201ENST00000530246 1959 ntBASIC17.36■□□□□ 0.37
RC3H1Q5TC82 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 AL513497.1-201ENST00000624273 2083 ntBASIC17.36■□□□□ 0.37
RC3H1Q5TC82 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 AC024075.2-201ENST00000598112 1473 ntBASIC17.36■□□□□ 0.37
RC3H1Q5TC82 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RC3H1Q5TC82 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms