Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.55■□□□□ 0.24
NEDD4P46934 CETP-203ENST00000566128 1733 ntTSL 5 BASIC16.55■□□□□ 0.24
NEDD4P46934 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEDD4P46934 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC16.55■□□□□ 0.24
NEDD4P46934 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NEDD4P46934 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEDD4P46934 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
NEDD4P46934 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC16.55■□□□□ 0.24
NEDD4P46934 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NEDD4P46934 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC16.55■□□□□ 0.24
NEDD4P46934 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
NEDD4P46934 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEDD4P46934 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEDD4P46934 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEDD4P46934 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
NEDD4P46934 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NEDD4P46934 TEKT4P2-202ENST00000559466 1312 ntBASIC16.55■□□□□ 0.24
NEDD4P46934 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEDD4P46934 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NEDD4P46934 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEDD4P46934 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEDD4P46934 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEDD4P46934 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NEDD4P46934 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC16.55■□□□□ 0.24
NEDD4P46934 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NEDD4P46934 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NEDD4P46934 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 AC079781.5-202ENST00000641784 3743 ntBASIC16.54■□□□□ 0.24
NEDD4P46934 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.54■□□□□ 0.24
NEDD4P46934 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.54■□□□□ 0.24
NEDD4P46934 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.54■□□□□ 0.24
NEDD4P46934 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.54■□□□□ 0.24
NEDD4P46934 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 AP000356.3-201ENST00000382243 753 ntBASIC16.54■□□□□ 0.24
NEDD4P46934 AL592076.1-201ENST00000424448 303 ntBASIC16.54■□□□□ 0.24
NEDD4P46934 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC16.54■□□□□ 0.24
NEDD4P46934 AL627422.1-201ENST00000434104 580 ntBASIC16.54■□□□□ 0.24
NEDD4P46934 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.54■□□□□ 0.24
NEDD4P46934 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.54■□□□□ 0.24
NEDD4P46934 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.54■□□□□ 0.24
NEDD4P46934 CD81-209ENST00000492627 886 ntTSL 3 BASIC16.54■□□□□ 0.24
NEDD4P46934 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.54■□□□□ 0.24
NEDD4P46934 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.54■□□□□ 0.24
NEDD4P46934 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.54■□□□□ 0.24
NEDD4P46934 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.54■□□□□ 0.24
NEDD4P46934 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.54■□□□□ 0.24
NEDD4P46934 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.54■□□□□ 0.24
NEDD4P46934 AC007881.3-201ENST00000608897 607 ntBASIC16.54■□□□□ 0.24
NEDD4P46934 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.54■□□□□ 0.24
NEDD4P46934 HPX-213ENST00000615166 826 ntTSL 5 BASIC16.54■□□□□ 0.24
NEDD4P46934 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
NEDD4P46934 AC103691.2-201ENST00000618824 433 ntBASIC16.54■□□□□ 0.24
NEDD4P46934 YRDCP1-201ENST00000621419 643 ntBASIC16.54■□□□□ 0.24
NEDD4P46934 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
NEDD4P46934 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC16.54■□□□□ 0.24
NEDD4P46934 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 AC005252.3-201ENST00000623855 2258 ntBASIC16.54■□□□□ 0.24
NEDD4P46934 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NEDD4P46934 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 AC138761.6-201ENST00000583997 1423 ntBASIC16.54■□□□□ 0.24
NEDD4P46934 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC16.54■□□□□ 0.24
NEDD4P46934 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.54■□□□□ 0.24
NEDD4P46934 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NEDD4P46934 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NEDD4P46934 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEDD4P46934 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEDD4P46934 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEDD4P46934 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NEDD4P46934 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NEDD4P46934 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEDD4P46934 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.53■□□□□ 0.24
NEDD4P46934 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
NEDD4P46934 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.53■□□□□ 0.24
NEDD4P46934 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.53■□□□□ 0.24
NEDD4P46934 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC16.53■□□□□ 0.24
NEDD4P46934 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.53■□□□□ 0.24
NEDD4P46934 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.53■□□□□ 0.24
NEDD4P46934 AC145285.5-201ENST00000562217 361 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms