Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AL773545.2-201ENST00000442149 472 ntBASIC17.19■□□□□ 0.34
PDE6BP35913 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC17.19■□□□□ 0.34
PDE6BP35913 AP000533.1-201ENST00000456143 1177 ntBASIC17.19■□□□□ 0.34
PDE6BP35913 AC112250.1-201ENST00000504640 745 ntBASIC17.19■□□□□ 0.34
PDE6BP35913 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC17.19■□□□□ 0.34
PDE6BP35913 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC17.19■□□□□ 0.34
PDE6BP35913 AC016582.2-202ENST00000587765 1094 ntBASIC17.19■□□□□ 0.34
PDE6BP35913 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC17.19■□□□□ 0.34
PDE6BP35913 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PDE6BP35913 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC17.19■□□□□ 0.34
PDE6BP35913 AC020904.3-201ENST00000624199 442 ntBASIC17.19■□□□□ 0.34
PDE6BP35913 BX322534.1-201ENST00000635574 241 ntBASIC17.19■□□□□ 0.34
PDE6BP35913 AC215524.1-201ENST00000635696 241 ntBASIC17.19■□□□□ 0.34
PDE6BP35913 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.19■□□□□ 0.34
PDE6BP35913 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6BP35913 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6BP35913 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6BP35913 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
PDE6BP35913 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.19■□□□□ 0.34
PDE6BP35913 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6BP35913 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6BP35913 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6BP35913 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.19■□□□□ 0.34
PDE6BP35913 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6BP35913 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PDE6BP35913 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6BP35913 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
PDE6BP35913 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6BP35913 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PDE6BP35913 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6BP35913 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6BP35913 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.18■□□□□ 0.34
PDE6BP35913 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6BP35913 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PDE6BP35913 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.18■□□□□ 0.34
PDE6BP35913 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6BP35913 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.18■□□□□ 0.34
PDE6BP35913 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PDE6BP35913 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6BP35913 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PDE6BP35913 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6BP35913 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6BP35913 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6BP35913 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PDE6BP35913 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6BP35913 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC17.18■□□□□ 0.34
PDE6BP35913 SNU13-204ENST00000402458 462 ntTSL 3 BASIC17.18■□□□□ 0.34
PDE6BP35913 AC010086.2-201ENST00000428616 226 ntBASIC17.18■□□□□ 0.34
PDE6BP35913 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC17.18■□□□□ 0.34
PDE6BP35913 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC17.18■□□□□ 0.34
PDE6BP35913 RPL29P2-201ENST00000488409 460 ntBASIC17.18■□□□□ 0.34
PDE6BP35913 CD44-224ENST00000526669 870 ntTSL 5 BASIC17.18■□□□□ 0.34
PDE6BP35913 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC17.18■□□□□ 0.34
PDE6BP35913 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6BP35913 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC17.18■□□□□ 0.34
PDE6BP35913 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC17.18■□□□□ 0.34
PDE6BP35913 AC080013.5-201ENST00000607044 679 ntBASIC17.18■□□□□ 0.34
PDE6BP35913 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6BP35913 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6BP35913 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6BP35913 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.18■□□□□ 0.34
PDE6BP35913 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.18■□□□□ 0.34
PDE6BP35913 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC17.18■□□□□ 0.34
PDE6BP35913 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PDE6BP35913 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.18■□□□□ 0.34
PDE6BP35913 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC17.18■□□□□ 0.34
PDE6BP35913 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6BP35913 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6BP35913 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PDE6BP35913 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6BP35913 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PDE6BP35913 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PDE6BP35913 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PDE6BP35913 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6BP35913 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC17.17■□□□□ 0.34
PDE6BP35913 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6BP35913 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.17■□□□□ 0.34
PDE6BP35913 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC17.17■□□□□ 0.34
PDE6BP35913 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6BP35913 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PDE6BP35913 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
PDE6BP35913 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PDE6BP35913 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6BP35913 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PDE6BP35913 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC17.17■□□□□ 0.34
PDE6BP35913 CCL19-202ENST00000378800 414 ntTSL 2 BASIC17.17■□□□□ 0.34
PDE6BP35913 NQO2-204ENST00000380454 851 ntTSL 2 BASIC17.17■□□□□ 0.34
PDE6BP35913 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6BP35913 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6BP35913 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC17.17■□□□□ 0.34
PDE6BP35913 RNU1-80P-201ENST00000459500 161 ntBASIC17.17■□□□□ 0.34
PDE6BP35913 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC17.17■□□□□ 0.34
PDE6BP35913 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6BP35913 AC004923.3-201ENST00000527532 355 ntBASIC17.17■□□□□ 0.34
PDE6BP35913 ACY3-202ENST00000529256 933 ntTSL 3 BASIC17.17■□□□□ 0.34
PDE6BP35913 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PDE6BP35913 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PDE6BP35913 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC17.17■□□□□ 0.34
PDE6BP35913 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6BP35913 KF455155.1-201ENST00000604493 303 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms