Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TOP2AP11388 AC026271.1-201ENST00000447794 1348 ntBASIC23.76■■□□□ 1.39
TOP2AP11388 HR-201ENST00000312841 5351 ntTSL 5 BASIC23.76■■□□□ 1.39
TOP2AP11388 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TOP2AP11388 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TOP2AP11388 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC23.76■■□□□ 1.39
TOP2AP11388 CA6-205ENST00000480186 1493 ntTSL 2 BASIC23.76■■□□□ 1.39
TOP2AP11388 LINC02486-201ENST00000604157 3000 ntBASIC23.75■■□□□ 1.39
TOP2AP11388 STK25-235ENST00000543554 2556 ntTSL 2 BASIC23.75■■□□□ 1.39
TOP2AP11388 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TOP2AP11388 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TOP2AP11388 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TOP2AP11388 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC23.75■■□□□ 1.39
TOP2AP11388 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TOP2AP11388 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC23.75■■□□□ 1.39
TOP2AP11388 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC23.75■■□□□ 1.39
TOP2AP11388 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
TOP2AP11388 IGKV1OR-2-201ENST00000457995 350 ntBASIC23.75■■□□□ 1.39
TOP2AP11388 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TOP2AP11388 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TOP2AP11388 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
TOP2AP11388 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC23.75■■□□□ 1.39
TOP2AP11388 EEF1DP7-201ENST00000580496 513 ntBASIC23.75■■□□□ 1.39
TOP2AP11388 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC23.75■■□□□ 1.39
TOP2AP11388 CR392039.2-201ENST00000623182 509 ntBASIC23.75■■□□□ 1.39
TOP2AP11388 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TOP2AP11388 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TOP2AP11388 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TOP2AP11388 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
TOP2AP11388 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC23.75■■□□□ 1.39
TOP2AP11388 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TOP2AP11388 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TOP2AP11388 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TOP2AP11388 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
TOP2AP11388 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
TOP2AP11388 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
TOP2AP11388 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
TOP2AP11388 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TOP2AP11388 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC23.75■■□□□ 1.39
TOP2AP11388 SNORD88B-201ENST00000408454 91 ntBASIC23.74■■□□□ 1.39
TOP2AP11388 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TOP2AP11388 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TOP2AP11388 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC23.74■■□□□ 1.39
TOP2AP11388 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TOP2AP11388 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TOP2AP11388 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TOP2AP11388 AC011239.2-201ENST00000624820 1489 ntBASIC23.74■■□□□ 1.39
TOP2AP11388 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TOP2AP11388 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
TOP2AP11388 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TOP2AP11388 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TOP2AP11388 OLA1P2-201ENST00000395519 1264 ntBASIC23.74■■□□□ 1.39
TOP2AP11388 RPL18AP15-201ENST00000430258 517 ntBASIC23.74■■□□□ 1.39
TOP2AP11388 AC092865.2-201ENST00000439409 971 ntBASIC23.74■■□□□ 1.39
TOP2AP11388 RN7SL846P-201ENST00000467429 292 ntBASIC23.74■■□□□ 1.39
TOP2AP11388 AF186996.6-201ENST00000485294 149 ntBASIC23.74■■□□□ 1.39
TOP2AP11388 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC23.74■■□□□ 1.39
TOP2AP11388 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC23.74■■□□□ 1.39
TOP2AP11388 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC23.74■■□□□ 1.39
TOP2AP11388 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
TOP2AP11388 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TOP2AP11388 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC23.74■■□□□ 1.39
TOP2AP11388 AC092535.4-201ENST00000609548 397 ntBASIC23.74■■□□□ 1.39
TOP2AP11388 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
TOP2AP11388 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
TOP2AP11388 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC23.73■■□□□ 1.39
TOP2AP11388 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TOP2AP11388 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TOP2AP11388 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TOP2AP11388 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC23.73■■□□□ 1.39
TOP2AP11388 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
TOP2AP11388 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TOP2AP11388 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TOP2AP11388 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TOP2AP11388 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC23.73■■□□□ 1.39
TOP2AP11388 POLR2LP1-206ENST00000444785 187 ntBASIC23.73■■□□□ 1.39
TOP2AP11388 RN7SL672P-201ENST00000474091 317 ntBASIC23.73■■□□□ 1.39
TOP2AP11388 IGHVII-33-1-201ENST00000524010 280 ntBASIC23.73■■□□□ 1.39
TOP2AP11388 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC23.73■■□□□ 1.39
TOP2AP11388 AC136475.7-201ENST00000602949 592 ntBASIC23.73■■□□□ 1.39
TOP2AP11388 AC009812.1-201ENST00000605948 1059 ntBASIC23.73■■□□□ 1.39
TOP2AP11388 NF1P11-201ENST00000621292 1282 ntBASIC23.73■■□□□ 1.39
TOP2AP11388 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC23.73■■□□□ 1.39
TOP2AP11388 COG6-212ENST00000630730 186 ntTSL 5 BASIC23.73■■□□□ 1.39
TOP2AP11388 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC23.73■■□□□ 1.39
TOP2AP11388 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TOP2AP11388 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TOP2AP11388 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
TOP2AP11388 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TOP2AP11388 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TOP2AP11388 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC23.72■■□□□ 1.39
TOP2AP11388 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC23.72■■□□□ 1.39
TOP2AP11388 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
TOP2AP11388 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
TOP2AP11388 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TOP2AP11388 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC23.72■■□□□ 1.39
TOP2AP11388 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC23.72■■□□□ 1.39
TOP2AP11388 AC104115.1-201ENST00000484005 623 ntBASIC23.72■■□□□ 1.39
TOP2AP11388 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC23.72■■□□□ 1.39
TOP2AP11388 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms