Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.66□□□□□ -0.06
CD48P09326 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.65□□□□□ -0.06
CD48P09326 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
CD48P09326 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.65□□□□□ -0.06
CD48P09326 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.65□□□□□ -0.06
CD48P09326 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CD48P09326 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CD48P09326 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.65□□□□□ -0.06
CD48P09326 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
CD48P09326 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.65□□□□□ -0.06
CD48P09326 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.65□□□□□ -0.06
CD48P09326 RN7SKP214-201ENST00000364208 315 ntBASIC14.65□□□□□ -0.06
CD48P09326 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 PFN1P12-201ENST00000455938 534 ntBASIC14.65□□□□□ -0.06
CD48P09326 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.65□□□□□ -0.06
CD48P09326 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.65□□□□□ -0.06
CD48P09326 MIR3188-201ENST00000583494 85 ntBASIC14.65□□□□□ -0.06
CD48P09326 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.65□□□□□ -0.06
CD48P09326 AC026740.1-201ENST00000607068 791 ntBASIC14.65□□□□□ -0.06
CD48P09326 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
CD48P09326 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.65□□□□□ -0.06
CD48P09326 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.65□□□□□ -0.06
CD48P09326 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CD48P09326 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.65□□□□□ -0.06
CD48P09326 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CD48P09326 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
CD48P09326 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.64□□□□□ -0.07
CD48P09326 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CD48P09326 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD48P09326 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.64□□□□□ -0.07
CD48P09326 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CD48P09326 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
CD48P09326 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CD48P09326 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.64□□□□□ -0.07
CD48P09326 AL445209.1-201ENST00000607269 3491 ntBASIC14.64□□□□□ -0.07
CD48P09326 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CD48P09326 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CD48P09326 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD48P09326 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD48P09326 AC004241.5-201ENST00000623870 2448 ntBASIC14.64□□□□□ -0.07
CD48P09326 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD48P09326 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD48P09326 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.64□□□□□ -0.07
CD48P09326 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD48P09326 ABCD1P2-201ENST00000429313 1601 ntBASIC14.64□□□□□ -0.07
CD48P09326 AL359845.1-201ENST00000458202 1648 ntBASIC14.64□□□□□ -0.07
CD48P09326 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CD48P09326 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.64□□□□□ -0.07
CD48P09326 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.64□□□□□ -0.07
CD48P09326 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.64□□□□□ -0.07
CD48P09326 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.64□□□□□ -0.07
CD48P09326 RN7SL530P-201ENST00000485097 298 ntBASIC14.64□□□□□ -0.07
CD48P09326 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.64□□□□□ -0.07
CD48P09326 ZNF767P-206ENST00000513792 565 ntBASIC14.64□□□□□ -0.07
CD48P09326 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CD48P09326 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.64□□□□□ -0.07
CD48P09326 RN7SL455P-201ENST00000580629 282 ntBASIC14.64□□□□□ -0.07
CD48P09326 MIR4538-201ENST00000581377 78 ntBASIC14.64□□□□□ -0.07
CD48P09326 RN7SL219P-201ENST00000582872 296 ntBASIC14.64□□□□□ -0.07
CD48P09326 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.64□□□□□ -0.07
CD48P09326 AL645939.5-201ENST00000606834 243 ntBASIC14.64□□□□□ -0.07
CD48P09326 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.64□□□□□ -0.07
CD48P09326 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD48P09326 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD48P09326 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.64□□□□□ -0.07
CD48P09326 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD48P09326 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.64□□□□□ -0.07
CD48P09326 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD48P09326 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.64□□□□□ -0.07
CD48P09326 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.64□□□□□ -0.07
CD48P09326 AL445250.1-201ENST00000641671 2259 ntBASIC14.64□□□□□ -0.07
CD48P09326 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CD48P09326 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD48P09326 PCDHA6-201ENST00000378126 3267 ntBASIC14.64□□□□□ -0.07
CD48P09326 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms