Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
GPC4O75487 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
GPC4O75487 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC4O75487 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
GPC4O75487 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GPC4O75487 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC4O75487 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GPC4O75487 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
GPC4O75487 MIR1908-201ENST00000410394 80 ntBASIC14.29□□□□□ -0.12
GPC4O75487 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GPC4O75487 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.29□□□□□ -0.12
GPC4O75487 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.29□□□□□ -0.12
GPC4O75487 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.29□□□□□ -0.12
GPC4O75487 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.29□□□□□ -0.12
GPC4O75487 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.29□□□□□ -0.12
GPC4O75487 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GPC4O75487 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.29□□□□□ -0.12
GPC4O75487 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.29□□□□□ -0.12
GPC4O75487 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.29□□□□□ -0.12
GPC4O75487 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GPC4O75487 AL160314.3-201ENST00000556041 767 ntBASIC14.29□□□□□ -0.12
GPC4O75487 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.29□□□□□ -0.12
GPC4O75487 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.29□□□□□ -0.12
GPC4O75487 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.29□□□□□ -0.12
GPC4O75487 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
GPC4O75487 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.29□□□□□ -0.12
GPC4O75487 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.29□□□□□ -0.12
GPC4O75487 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.29□□□□□ -0.12
GPC4O75487 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC4O75487 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC4O75487 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.29□□□□□ -0.12
GPC4O75487 REXO1L6P-201ENST00000603433 1515 ntBASIC14.29□□□□□ -0.12
GPC4O75487 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC4O75487 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
GPC4O75487 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GPC4O75487 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC4O75487 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.29□□□□□ -0.12
GPC4O75487 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
GPC4O75487 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
GPC4O75487 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC4O75487 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
GPC4O75487 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.29□□□□□ -0.12
GPC4O75487 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.29□□□□□ -0.12
GPC4O75487 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.29□□□□□ -0.12
GPC4O75487 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GPC4O75487 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GPC4O75487 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC14.29□□□□□ -0.12
GPC4O75487 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
GPC4O75487 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
GPC4O75487 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
GPC4O75487 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.28□□□□□ -0.12
GPC4O75487 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
GPC4O75487 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
GPC4O75487 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.28□□□□□ -0.12
GPC4O75487 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
GPC4O75487 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
GPC4O75487 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.28□□□□□ -0.12
GPC4O75487 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.28□□□□□ -0.12
GPC4O75487 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.28□□□□□ -0.12
GPC4O75487 ST13P19-201ENST00000442505 1124 ntBASIC14.28□□□□□ -0.12
GPC4O75487 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.28□□□□□ -0.12
GPC4O75487 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.28□□□□□ -0.12
GPC4O75487 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.28□□□□□ -0.12
GPC4O75487 FAM8A2P-201ENST00000528813 1142 ntBASIC14.28□□□□□ -0.12
GPC4O75487 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.28□□□□□ -0.12
GPC4O75487 RBM8B-201ENST00000555532 525 ntBASIC14.28□□□□□ -0.12
GPC4O75487 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.28□□□□□ -0.12
GPC4O75487 AC104982.3-201ENST00000581995 514 ntBASIC14.28□□□□□ -0.12
GPC4O75487 AC005962.1-201ENST00000584100 773 ntBASIC14.28□□□□□ -0.12
GPC4O75487 AC073957.3-201ENST00000609998 6758 ntBASIC14.28□□□□□ -0.12
GPC4O75487 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.28□□□□□ -0.12
GPC4O75487 AP000346.4-201ENST00000614827 381 ntBASIC14.28□□□□□ -0.12
GPC4O75487 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.28□□□□□ -0.12
GPC4O75487 AC022748.3-201ENST00000621828 275 ntBASIC14.28□□□□□ -0.12
GPC4O75487 AC144522.1-201ENST00000625111 1658 ntBASIC14.28□□□□□ -0.12
GPC4O75487 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
GPC4O75487 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.28□□□□□ -0.12
GPC4O75487 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.28□□□□□ -0.12
GPC4O75487 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
GPC4O75487 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GPC4O75487 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms