Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.23□□□□□ -0.13
SMAD6O43541 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SMAD6O43541 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.22□□□□□ -0.13
SMAD6O43541 RN7SKP109-201ENST00000410592 316 ntBASIC14.22□□□□□ -0.13
SMAD6O43541 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.22□□□□□ -0.13
SMAD6O43541 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC14.22□□□□□ -0.13
SMAD6O43541 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.22□□□□□ -0.13
SMAD6O43541 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.22□□□□□ -0.13
SMAD6O43541 MPRIPP1-201ENST00000452433 1089 ntBASIC14.22□□□□□ -0.13
SMAD6O43541 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.22□□□□□ -0.13
SMAD6O43541 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.22□□□□□ -0.13
SMAD6O43541 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC14.22□□□□□ -0.13
SMAD6O43541 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC14.22□□□□□ -0.13
SMAD6O43541 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14.22□□□□□ -0.13
SMAD6O43541 AC007250.1-201ENST00000608934 338 ntBASIC14.22□□□□□ -0.13
SMAD6O43541 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SMAD6O43541 AC011491.1-203ENST00000637688 543 ntBASIC14.22□□□□□ -0.13
SMAD6O43541 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.22□□□□□ -0.13
SMAD6O43541 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.22□□□□□ -0.13
SMAD6O43541 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SMAD6O43541 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SMAD6O43541 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.22□□□□□ -0.13
SMAD6O43541 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMAD6O43541 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SMAD6O43541 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SMAD6O43541 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.21□□□□□ -0.13
SMAD6O43541 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.21□□□□□ -0.13
SMAD6O43541 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SMAD6O43541 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SMAD6O43541 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SMAD6O43541 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.21□□□□□ -0.13
SMAD6O43541 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.21□□□□□ -0.13
SMAD6O43541 GRPEL2P1-201ENST00000453145 339 ntBASIC14.21□□□□□ -0.13
SMAD6O43541 AC079112.1-201ENST00000454972 939 ntBASIC14.21□□□□□ -0.13
SMAD6O43541 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SMAD6O43541 AC008267.1-201ENST00000474858 1069 ntBASIC14.21□□□□□ -0.13
SMAD6O43541 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.21□□□□□ -0.13
SMAD6O43541 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC14.21□□□□□ -0.13
SMAD6O43541 AL031673.1-201ENST00000611460 466 ntBASIC14.21□□□□□ -0.13
SMAD6O43541 AC091769.1-201ENST00000619576 568 ntBASIC14.21□□□□□ -0.13
SMAD6O43541 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.21□□□□□ -0.13
SMAD6O43541 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SMAD6O43541 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SMAD6O43541 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SMAD6O43541 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SMAD6O43541 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
SMAD6O43541 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.21□□□□□ -0.13
SMAD6O43541 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMAD6O43541 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SMAD6O43541 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SMAD6O43541 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SMAD6O43541 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SMAD6O43541 AC073869.1-201ENST00000415574 2762 ntBASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms