Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC17.92■□□□□ 0.46
CHL1O00533 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHL1O00533 CROT-203ENST00000419147 2959 ntTSL 2 BASIC17.92■□□□□ 0.46
CHL1O00533 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHL1O00533 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHL1O00533 STK3-218ENST00000617590 2485 ntTSL 5 BASIC17.92■□□□□ 0.46
CHL1O00533 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.92■□□□□ 0.46
CHL1O00533 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHL1O00533 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.92■□□□□ 0.46
CHL1O00533 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHL1O00533 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHL1O00533 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHL1O00533 OR7E115P-201ENST00000382617 1024 ntBASIC17.92■□□□□ 0.46
CHL1O00533 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.92■□□□□ 0.46
CHL1O00533 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHL1O00533 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHL1O00533 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.92■□□□□ 0.46
CHL1O00533 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC17.92■□□□□ 0.46
CHL1O00533 ACTG1P19-201ENST00000418987 1116 ntBASIC17.92■□□□□ 0.46
CHL1O00533 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CHL1O00533 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC17.92■□□□□ 0.46
CHL1O00533 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CHL1O00533 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC17.92■□□□□ 0.46
CHL1O00533 VENTXP3-201ENST00000546480 773 ntBASIC17.92■□□□□ 0.46
CHL1O00533 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHL1O00533 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC17.92■□□□□ 0.46
CHL1O00533 AL118522.1-201ENST00000611368 560 ntBASIC17.92■□□□□ 0.46
CHL1O00533 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CHL1O00533 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHL1O00533 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CHL1O00533 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC17.92■□□□□ 0.46
CHL1O00533 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHL1O00533 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC17.92■□□□□ 0.46
CHL1O00533 AC021305.1-201ENST00000520656 1514 ntBASIC17.92■□□□□ 0.46
CHL1O00533 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC17.92■□□□□ 0.46
CHL1O00533 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHL1O00533 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CHL1O00533 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CHL1O00533 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CHL1O00533 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC17.92■□□□□ 0.46
CHL1O00533 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHL1O00533 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHL1O00533 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHL1O00533 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC17.92■□□□□ 0.46
CHL1O00533 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHL1O00533 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHL1O00533 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CHL1O00533 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CHL1O00533 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC17.91■□□□□ 0.46
CHL1O00533 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHL1O00533 FAM90A12P-201ENST00000519497 2375 ntBASIC17.91■□□□□ 0.46
CHL1O00533 FAM90A24P-201ENST00000520792 2369 ntBASIC17.91■□□□□ 0.46
CHL1O00533 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CHL1O00533 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHL1O00533 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC17.91■□□□□ 0.46
CHL1O00533 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CHL1O00533 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC17.91■□□□□ 0.46
CHL1O00533 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHL1O00533 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CHL1O00533 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHL1O00533 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHL1O00533 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHL1O00533 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHL1O00533 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHL1O00533 BAK1P1-201ENST00000317045 636 ntBASIC17.91■□□□□ 0.46
CHL1O00533 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CHL1O00533 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHL1O00533 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC17.91■□□□□ 0.46
CHL1O00533 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC17.91■□□□□ 0.46
CHL1O00533 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.91■□□□□ 0.46
CHL1O00533 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC17.91■□□□□ 0.46
CHL1O00533 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC17.91■□□□□ 0.46
CHL1O00533 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC17.91■□□□□ 0.46
CHL1O00533 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC17.91■□□□□ 0.46
CHL1O00533 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC17.91■□□□□ 0.46
CHL1O00533 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHL1O00533 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHL1O00533 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CHL1O00533 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CHL1O00533 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC17.91■□□□□ 0.46
CHL1O00533 AC020917.4-201ENST00000623994 1999 ntBASIC17.91■□□□□ 0.46
CHL1O00533 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHL1O00533 AC041040.2-201ENST00000622926 2899 ntBASIC17.91■□□□□ 0.46
CHL1O00533 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHL1O00533 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC17.91■□□□□ 0.46
CHL1O00533 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CHL1O00533 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
CHL1O00533 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHL1O00533 FUCA1P1-201ENST00000374476 1351 ntBASIC17.91■□□□□ 0.46
CHL1O00533 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHL1O00533 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHL1O00533 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHL1O00533 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHL1O00533 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHL1O00533 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHL1O00533 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC17.9■□□□□ 0.46
CHL1O00533 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CHL1O00533 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHL1O00533 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CHL1O00533 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms