Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 FAM58BP-201ENST00000439056 645 ntBASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 AL645933.1-201ENST00000440087 609 ntBASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 EEF1DP1-201ENST00000585891 896 ntBASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 AC133552.6-201ENST00000613406 534 ntBASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 AL035252.4-201ENST00000624174 288 ntBASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR1DQ9Y2S0 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 AL157407.1-201ENST00000435784 904 ntBASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 AC012441.2-201ENST00000444843 739 ntBASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR1DQ9Y2S0 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms