Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 OR2R1P-201ENST00000441404 914 ntBASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 AC090857.1-201ENST00000527400 390 ntBASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 AL645939.5-201ENST00000606834 243 ntBASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 AC027601.5-201ENST00000624065 2482 ntBASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.78□□□□□ -0.36
PARPBPQ9NWS1 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PARPBPQ9NWS1 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PARPBPQ9NWS1 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
PARPBPQ9NWS1 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
PARPBPQ9NWS1 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
PARPBPQ9NWS1 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
PARPBPQ9NWS1 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.77□□□□□ -0.36
PARPBPQ9NWS1 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.36
PARPBPQ9NWS1 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
PARPBPQ9NWS1 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.36
PARPBPQ9NWS1 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
PARPBPQ9NWS1 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PARPBPQ9NWS1 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 CALR4P-201ENST00000431943 946 ntBASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 POU5F1P2-201ENST00000521750 823 ntBASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 GPR182-203ENST00000622922 591 ntBASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 TUBB8P4-201ENST00000511806 1324 ntBASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 AC152010.1-201ENST00000415779 2006 ntBASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 HSPA8P5-201ENST00000456928 2069 ntBASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
PARPBPQ9NWS1 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms