Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 AC027369.3-201ENST00000530465 3707 ntBASIC15.83■□□□□ 0.12
CBX8Q9HC52 MIR326-201ENST00000362220 95 ntBASIC15.83■□□□□ 0.12
CBX8Q9HC52 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.83■□□□□ 0.12
CBX8Q9HC52 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CBX8Q9HC52 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CBX8Q9HC52 AL136309.1-201ENST00000403917 691 ntBASIC15.83■□□□□ 0.12
CBX8Q9HC52 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CBX8Q9HC52 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.83■□□□□ 0.12
CBX8Q9HC52 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.83■□□□□ 0.12
CBX8Q9HC52 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.83■□□□□ 0.12
CBX8Q9HC52 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC15.83■□□□□ 0.12
CBX8Q9HC52 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.83■□□□□ 0.12
CBX8Q9HC52 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.83■□□□□ 0.12
CBX8Q9HC52 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CBX8Q9HC52 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.83■□□□□ 0.12
CBX8Q9HC52 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.83■□□□□ 0.12
CBX8Q9HC52 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.83■□□□□ 0.12
CBX8Q9HC52 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.83■□□□□ 0.12
CBX8Q9HC52 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CBX8Q9HC52 AC004233.3-201ENST00000607794 1269 ntBASIC15.83■□□□□ 0.12
CBX8Q9HC52 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CBX8Q9HC52 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CBX8Q9HC52 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CBX8Q9HC52 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC15.83■□□□□ 0.12
CBX8Q9HC52 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.83■□□□□ 0.12
CBX8Q9HC52 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CBX8Q9HC52 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC15.83■□□□□ 0.12
CBX8Q9HC52 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC15.83■□□□□ 0.12
CBX8Q9HC52 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CBX8Q9HC52 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CBX8Q9HC52 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CBX8Q9HC52 MARK2P16-201ENST00000605714 1723 ntBASIC15.82■□□□□ 0.12
CBX8Q9HC52 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC15.82■□□□□ 0.12
CBX8Q9HC52 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC15.82■□□□□ 0.12
CBX8Q9HC52 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.82■□□□□ 0.12
CBX8Q9HC52 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.82■□□□□ 0.12
CBX8Q9HC52 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.82■□□□□ 0.12
CBX8Q9HC52 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.82■□□□□ 0.12
CBX8Q9HC52 INGX-202ENST00000489074 768 ntBASIC15.82■□□□□ 0.12
CBX8Q9HC52 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.82■□□□□ 0.12
CBX8Q9HC52 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.82■□□□□ 0.12
CBX8Q9HC52 COX5BP1-201ENST00000507622 393 ntBASIC15.82■□□□□ 0.12
CBX8Q9HC52 AP001889.1-201ENST00000525414 633 ntBASIC15.82■□□□□ 0.12
CBX8Q9HC52 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.82■□□□□ 0.12
CBX8Q9HC52 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC15.82■□□□□ 0.12
CBX8Q9HC52 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.82■□□□□ 0.12
CBX8Q9HC52 AL136301.1-201ENST00000615830 422 ntBASIC15.82■□□□□ 0.12
CBX8Q9HC52 AC090386.2-201ENST00000623010 1039 ntBASIC15.82■□□□□ 0.12
CBX8Q9HC52 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.82■□□□□ 0.12
CBX8Q9HC52 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 AL590824.1-201ENST00000403828 1349 ntBASIC15.82■□□□□ 0.12
CBX8Q9HC52 SHMT1P1-201ENST00000419974 1312 ntBASIC15.82■□□□□ 0.12
CBX8Q9HC52 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 AL358781.1-202ENST00000321081 1360 ntBASIC15.82■□□□□ 0.12
CBX8Q9HC52 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC15.82■□□□□ 0.12
CBX8Q9HC52 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CBX8Q9HC52 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC15.82■□□□□ 0.12
CBX8Q9HC52 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX8Q9HC52 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX8Q9HC52 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX8Q9HC52 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX8Q9HC52 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX8Q9HC52 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX8Q9HC52 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX8Q9HC52 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CBX8Q9HC52 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CBX8Q9HC52 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CBX8Q9HC52 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CBX8Q9HC52 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CBX8Q9HC52 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms