Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 AC009884.2-201ENST00000603110 324 ntBASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 AL591471.1-201ENST00000621855 229 ntBASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 AL139385.1-201ENST00000611744 3272 ntBASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 AL590824.1-201ENST00000403828 1349 ntBASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 AC103592.1-201ENST00000394513 664 ntBASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 HMGA1P1-201ENST00000415560 1062 ntBASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 HIST2H2BB-201ENST00000449108 381 ntBASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 AC140658.4-201ENST00000561990 352 ntBASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 AC124068.2-201ENST00000569473 1109 ntBASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
POLR2J2Q9GZM3 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 CR383656.2-201ENST00000548656 2254 ntBASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 SHMT1P1-201ENST00000419974 1312 ntBASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 AC012441.2-201ENST00000444843 739 ntBASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 AC022217.1-201ENST00000521069 738 ntBASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 AC023310.1-201ENST00000554836 735 ntBASIC13.16□□□□□ -0.3
POLR2J2Q9GZM3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms