Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AL133467.4-201ENST00000602953 725 ntBASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AC012073.1-201ENST00000606114 1108 ntBASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AC104506.1-201ENST00000609247 429 ntBASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AL031673.1-201ENST00000611460 466 ntBASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 PPIA-210ENST00000620047 827 ntTSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 HELLS-212ENST00000630929 400 ntTSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 TKT-201ENST00000296289 1931 ntTSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 ST20-AS1-201ENST00000560255 4223 ntBASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 EGLN3-205ENST00000547327 2849 ntBASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 KRT8P43-201ENST00000406052 1458 ntBASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRTAP4-3Q9BYR4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-3Q9BYR4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms