Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 DPM3-202ENST00000368399 517 ntBASIC12.94□□□□□ -0.34
USB1Q9BQ65 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 MIR769-201ENST00000390225 118 ntBASIC12.94□□□□□ -0.34
USB1Q9BQ65 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 IL12A-AS1-201ENST00000462431 988 ntTSL 5 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 AC013355.1-201ENST00000562625 723 ntBASIC12.94□□□□□ -0.34
USB1Q9BQ65 NDUFV2P1-201ENST00000596415 907 ntBASIC12.94□□□□□ -0.34
USB1Q9BQ65 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 AC016597.2-201ENST00000613256 341 ntBASIC12.94□□□□□ -0.34
USB1Q9BQ65 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 LINC01230-201ENST00000625222 3017 ntBASIC12.94□□□□□ -0.34
USB1Q9BQ65 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 PEG13-201ENST00000631594 5667 ntBASIC12.94□□□□□ -0.34
USB1Q9BQ65 AC140479.7-201ENST00000636301 2332 ntBASIC12.94□□□□□ -0.34
USB1Q9BQ65 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USB1Q9BQ65 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.94□□□□□ -0.34
USB1Q9BQ65 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.93□□□□□ -0.34
USB1Q9BQ65 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.93□□□□□ -0.34
USB1Q9BQ65 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.93□□□□□ -0.34
USB1Q9BQ65 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
USB1Q9BQ65 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
USB1Q9BQ65 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
USB1Q9BQ65 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.93□□□□□ -0.34
USB1Q9BQ65 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
USB1Q9BQ65 MRPL37P1-201ENST00000592451 1337 ntBASIC12.93□□□□□ -0.34
USB1Q9BQ65 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
USB1Q9BQ65 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
USB1Q9BQ65 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
USB1Q9BQ65 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
USB1Q9BQ65 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.93□□□□□ -0.34
USB1Q9BQ65 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.93□□□□□ -0.34
USB1Q9BQ65 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
USB1Q9BQ65 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
USB1Q9BQ65 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
USB1Q9BQ65 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.93□□□□□ -0.34
USB1Q9BQ65 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.93□□□□□ -0.34
USB1Q9BQ65 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
USB1Q9BQ65 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.93□□□□□ -0.34
USB1Q9BQ65 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
USB1Q9BQ65 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
USB1Q9BQ65 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
USB1Q9BQ65 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.93□□□□□ -0.34
USB1Q9BQ65 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.93□□□□□ -0.34
USB1Q9BQ65 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.93□□□□□ -0.34
USB1Q9BQ65 NUCKS1P1-201ENST00000452067 703 ntBASIC12.93□□□□□ -0.34
USB1Q9BQ65 PPP1R26-AS1-201ENST00000455039 643 ntTSL 4 BASIC12.93□□□□□ -0.34
USB1Q9BQ65 RN7SKP157-201ENST00000516174 282 ntBASIC12.93□□□□□ -0.34
USB1Q9BQ65 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.93□□□□□ -0.34
USB1Q9BQ65 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC12.93□□□□□ -0.34
USB1Q9BQ65 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
USB1Q9BQ65 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.93□□□□□ -0.34
USB1Q9BQ65 AC018695.4-201ENST00000602706 689 ntTSL 5 BASIC12.93□□□□□ -0.34
USB1Q9BQ65 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms