Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
TM9SF4Q92544 AL805961.1-201ENST00000642026 753 ntBASIC13.47□□□□□ -0.25
TM9SF4Q92544 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.47□□□□□ -0.25
TM9SF4Q92544 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.47□□□□□ -0.25
TM9SF4Q92544 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.47□□□□□ -0.25
TM9SF4Q92544 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.47□□□□□ -0.25
TM9SF4Q92544 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.47□□□□□ -0.25
TM9SF4Q92544 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.47□□□□□ -0.25
TM9SF4Q92544 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TM9SF4Q92544 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.47□□□□□ -0.25
TM9SF4Q92544 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.47□□□□□ -0.25
TM9SF4Q92544 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TM9SF4Q92544 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.47□□□□□ -0.25
TM9SF4Q92544 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TM9SF4Q92544 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TM9SF4Q92544 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TM9SF4Q92544 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TM9SF4Q92544 AL356585.2-201ENST00000625078 2396 ntBASIC13.46□□□□□ -0.25
TM9SF4Q92544 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TM9SF4Q92544 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.46□□□□□ -0.25
TM9SF4Q92544 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.46□□□□□ -0.25
TM9SF4Q92544 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TM9SF4Q92544 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TM9SF4Q92544 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TM9SF4Q92544 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
TM9SF4Q92544 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TM9SF4Q92544 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.46□□□□□ -0.25
TM9SF4Q92544 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TM9SF4Q92544 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TM9SF4Q92544 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TM9SF4Q92544 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.46□□□□□ -0.25
TM9SF4Q92544 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.46□□□□□ -0.25
TM9SF4Q92544 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TM9SF4Q92544 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC13.46□□□□□ -0.25
TM9SF4Q92544 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TM9SF4Q92544 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.46□□□□□ -0.25
TM9SF4Q92544 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TM9SF4Q92544 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TM9SF4Q92544 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.46□□□□□ -0.25
TM9SF4Q92544 AL645933.1-201ENST00000440087 609 ntBASIC13.46□□□□□ -0.25
TM9SF4Q92544 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TM9SF4Q92544 AC104784.1-201ENST00000473096 294 ntBASIC13.46□□□□□ -0.25
TM9SF4Q92544 RN7SL818P-201ENST00000485099 259 ntBASIC13.46□□□□□ -0.25
TM9SF4Q92544 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TM9SF4Q92544 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.46□□□□□ -0.25
TM9SF4Q92544 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TM9SF4Q92544 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.46□□□□□ -0.25
TM9SF4Q92544 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.46□□□□□ -0.25
TM9SF4Q92544 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TM9SF4Q92544 AC093752.3-201ENST00000567343 901 ntBASIC13.46□□□□□ -0.25
TM9SF4Q92544 AC026803.1-201ENST00000569130 274 ntBASIC13.46□□□□□ -0.25
TM9SF4Q92544 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
TM9SF4Q92544 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.46□□□□□ -0.25
TM9SF4Q92544 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC13.46□□□□□ -0.25
TM9SF4Q92544 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.46□□□□□ -0.25
TM9SF4Q92544 RN7SL725P-201ENST00000606439 259 ntBASIC13.46□□□□□ -0.25
TM9SF4Q92544 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.46□□□□□ -0.25
TM9SF4Q92544 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TM9SF4Q92544 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
TM9SF4Q92544 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.46□□□□□ -0.26
TM9SF4Q92544 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
TM9SF4Q92544 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TM9SF4Q92544 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TM9SF4Q92544 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
TM9SF4Q92544 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TM9SF4Q92544 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TM9SF4Q92544 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
TM9SF4Q92544 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.26
TM9SF4Q92544 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TM9SF4Q92544 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TM9SF4Q92544 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TM9SF4Q92544 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TM9SF4Q92544 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TM9SF4Q92544 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TM9SF4Q92544 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms