Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
COL22A1Q8NFW1 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 GBAP1-208ENST00000566701 1546 ntBASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 AL356583.1-201ENST00000398739 1371 ntBASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 GSTM1-204ENST00000369823 852 ntTSL 3 BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 KHDC1L-201ENST00000370388 635 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 AL356583.3-201ENST00000412354 417 ntBASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 PEBP1P1-201ENST00000554856 510 ntBASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 AL121992.3-201ENST00000606186 346 ntBASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 POM121L14P-201ENST00000406100 1558 ntBASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL22A1Q8NFW1 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 RN7SL16P-201ENST00000476316 269 ntBASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 AP001922.5-201ENST00000527803 651 ntTSL 4 BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 CREBRF-203ENST00000520420 1660 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 AC124319.4-201ENST00000622931 2161 ntBASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 AC023824.1-201ENST00000562945 2975 ntBASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 RPL21P135-201ENST00000442539 791 ntBASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 PRDX2P3-201ENST00000515779 586 ntBASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 SLC25A51P3-201ENST00000521814 889 ntBASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 GABARAPL1-203ENST00000535576 792 ntTSL 5 BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 MIR1587-201ENST00000583319 53 ntBASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 AP005264.6-203ENST00000586882 1050 ntTSL 5 BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 U62317.4-201ENST00000609758 448 ntBASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.98■□□□□ 0.47
COL22A1Q8NFW1 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.97■□□□□ 0.47
COL22A1Q8NFW1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.97■□□□□ 0.47
COL22A1Q8NFW1 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.97■□□□□ 0.47
COL22A1Q8NFW1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL22A1Q8NFW1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL22A1Q8NFW1 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.97■□□□□ 0.47
COL22A1Q8NFW1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL22A1Q8NFW1 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL22A1Q8NFW1 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL22A1Q8NFW1 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL22A1Q8NFW1 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL22A1Q8NFW1 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
COL22A1Q8NFW1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL22A1Q8NFW1 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL22A1Q8NFW1 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
COL22A1Q8NFW1 RNF7-202ENST00000393000 805 ntTSL 2 BASIC17.97■□□□□ 0.47
COL22A1Q8NFW1 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
COL22A1Q8NFW1 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC17.97■□□□□ 0.47
COL22A1Q8NFW1 AK2P2-201ENST00000439142 405 ntBASIC17.97■□□□□ 0.47
COL22A1Q8NFW1 CFL1P1-204ENST00000456375 424 ntTSL 3 BASIC17.97■□□□□ 0.47
COL22A1Q8NFW1 RN7SL487P-201ENST00000468140 344 ntBASIC17.97■□□□□ 0.47
COL22A1Q8NFW1 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC17.97■□□□□ 0.47
COL22A1Q8NFW1 AC104117.1-201ENST00000517817 900 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms