Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
NUP35Q8NFH5 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
NUP35Q8NFH5 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
NUP35Q8NFH5 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
NUP35Q8NFH5 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
NUP35Q8NFH5 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 AC073957.3-201ENST00000609998 6758 ntBASIC10.61□□□□□ -0.71
NUP35Q8NFH5 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 AC010336.1-201ENST00000539278 4739 ntBASIC10.61□□□□□ -0.71
NUP35Q8NFH5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 AL139400.1-201ENST00000366220 510 ntBASIC10.61□□□□□ -0.71
NUP35Q8NFH5 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 AP001582.1-201ENST00000525856 295 ntBASIC10.61□□□□□ -0.71
NUP35Q8NFH5 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 AL121894.2-201ENST00000602977 491 ntBASIC10.61□□□□□ -0.71
NUP35Q8NFH5 AC004835.2-201ENST00000603762 682 ntBASIC10.61□□□□□ -0.71
NUP35Q8NFH5 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 AC009093.7-201ENST00000623853 1223 ntBASIC10.61□□□□□ -0.71
NUP35Q8NFH5 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 ABBA01031660.1-201ENST00000635219 756 ntBASIC10.61□□□□□ -0.71
NUP35Q8NFH5 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 RCC2P1-201ENST00000452257 1476 ntBASIC10.61□□□□□ -0.71
NUP35Q8NFH5 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC10.61□□□□□ -0.71
NUP35Q8NFH5 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
NUP35Q8NFH5 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
NUP35Q8NFH5 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC10.6□□□□□ -0.71
NUP35Q8NFH5 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
NUP35Q8NFH5 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NUP35Q8NFH5 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
NUP35Q8NFH5 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC10.6□□□□□ -0.71
NUP35Q8NFH5 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC10.6□□□□□ -0.71
NUP35Q8NFH5 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC10.6□□□□□ -0.71
NUP35Q8NFH5 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NUP35Q8NFH5 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NUP35Q8NFH5 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC10.6□□□□□ -0.71
NUP35Q8NFH5 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
NUP35Q8NFH5 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NUP35Q8NFH5 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC10.6□□□□□ -0.71
NUP35Q8NFH5 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
NUP35Q8NFH5 OR2I1P-208ENST00000641137 4948 ntBASIC10.6□□□□□ -0.71
NUP35Q8NFH5 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NUP35Q8NFH5 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
NUP35Q8NFH5 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms