Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 AC100858.1-201ENST00000514059 1228 ntBASIC15.27■□□□□ 0.04
HERC6Q8IVU3 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 KNOP1P1-201ENST00000542108 989 ntBASIC15.27■□□□□ 0.04
HERC6Q8IVU3 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HERC6Q8IVU3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HERC6Q8IVU3 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC15.27■□□□□ 0.03
HERC6Q8IVU3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HERC6Q8IVU3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
HERC6Q8IVU3 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC15.27■□□□□ 0.03
HERC6Q8IVU3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HERC6Q8IVU3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HERC6Q8IVU3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.27■□□□□ 0.03
HERC6Q8IVU3 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HERC6Q8IVU3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HERC6Q8IVU3 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
HERC6Q8IVU3 AC104581.4-201ENST00000623126 3052 ntBASIC15.27■□□□□ 0.03
HERC6Q8IVU3 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.27■□□□□ 0.03
HERC6Q8IVU3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
HERC6Q8IVU3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.27■□□□□ 0.03
HERC6Q8IVU3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HERC6Q8IVU3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
HERC6Q8IVU3 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
HERC6Q8IVU3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
HERC6Q8IVU3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HERC6Q8IVU3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 OR2I1P-210ENST00000642037 4691 ntBASIC15.26■□□□□ 0.03
HERC6Q8IVU3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 PIFO-201ENST00000369737 746 ntTSL 2 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 GEMIN8P4-201ENST00000380526 729 ntBASIC15.26■□□□□ 0.03
HERC6Q8IVU3 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 AC023906.1-201ENST00000486386 453 ntBASIC15.26■□□□□ 0.03
HERC6Q8IVU3 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 F11R-204ENST00000537746 1245 ntTSL 2 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 BATF-202ENST00000555504 361 ntTSL 2 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 DLK1-205ENST00000556051 469 ntTSL 2 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 SORD2P-201ENST00000558556 1069 ntBASIC15.26■□□□□ 0.03
HERC6Q8IVU3 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 AC018846.1-201ENST00000568231 183 ntBASIC15.26■□□□□ 0.03
HERC6Q8IVU3 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HERC6Q8IVU3 AL390755.1-201ENST00000623716 2027 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms