Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 HLA-C-210ENST00000640219 976 ntBASIC15.77■□□□□ 0.12
TRIM50Q86XT4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
TRIM50Q86XT4 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.77■□□□□ 0.11
TRIM50Q86XT4 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM50Q86XT4 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TRIM50Q86XT4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.77■□□□□ 0.11
TRIM50Q86XT4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TRIM50Q86XT4 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 AC103592.1-201ENST00000394513 664 ntBASIC15.76■□□□□ 0.11
TRIM50Q86XT4 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 CSNK1G2P1-201ENST00000442675 955 ntBASIC15.76■□□□□ 0.11
TRIM50Q86XT4 AC114501.1-201ENST00000445949 172 ntBASIC15.76■□□□□ 0.11
TRIM50Q86XT4 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 RPS23-204ENST00000507980 836 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 RNA5SP406-201ENST00000516106 112 ntBASIC15.76■□□□□ 0.11
TRIM50Q86XT4 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 KRT8P2-201ENST00000556193 944 ntBASIC15.76■□□□□ 0.11
TRIM50Q86XT4 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 AC140113.1-201ENST00000603467 169 ntBASIC15.76■□□□□ 0.11
TRIM50Q86XT4 AC127024.7-201ENST00000625101 200 ntBASIC15.76■□□□□ 0.11
TRIM50Q86XT4 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.76■□□□□ 0.11
TRIM50Q86XT4 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 AC019109.1-201ENST00000401725 1874 ntBASIC15.76■□□□□ 0.11
TRIM50Q86XT4 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRIM50Q86XT4 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 RNVU1-8-201ENST00000364272 125 ntBASIC15.75■□□□□ 0.11
TRIM50Q86XT4 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 LINC00634-202ENST00000505157 222 ntBASIC15.75■□□□□ 0.11
TRIM50Q86XT4 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 MIR5196-201ENST00000578146 115 ntBASIC15.75■□□□□ 0.11
TRIM50Q86XT4 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM50Q86XT4 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms