Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 AC092933.1-201ENST00000393644 945 ntBASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 TLE1P1-201ENST00000422965 589 ntBASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 FTH1P14-201ENST00000482930 551 ntBASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 PEG13-201ENST00000631594 5667 ntBASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 AL138709.1-201ENST00000614840 1693 ntBASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 AC018445.4-201ENST00000624066 2291 ntBASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 AC092139.4-201ENST00000624318 2794 ntBASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM53Q6P2H8 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 POM121L14P-201ENST00000406100 1558 ntBASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 BOLA2P3-201ENST00000404566 256 ntBASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 AC007551.1-201ENST00000457394 519 ntBASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 AC073335.2-201ENST00000610177 3441 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms