Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.33■□□□□ 0.2
SHROOM1Q2M3G4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 AC023908.3-201ENST00000564211 3047 ntBASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 IDS-203ENST00000428056 1213 ntTSL 2 BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 AL139008.1-201ENST00000437894 228 ntBASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 AC090136.2-201ENST00000517809 420 ntBASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 FAM86B3P-203ENST00000523992 854 ntBASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 AL118516.1-201ENST00000564152 670 ntBASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.32■□□□□ 0.2
SHROOM1Q2M3G4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 SURF4-203ENST00000371991 715 ntTSL 3 BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 BPIFB5P-201ENST00000457066 1099 ntBASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 DLK1-205ENST00000556051 469 ntTSL 2 BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms