Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN20P56880 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN20P56880 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.07□□□□□ -0.32
CLDN20P56880 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN20P56880 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CLDN20P56880 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN20P56880 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN20P56880 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.06□□□□□ -0.32
CLDN20P56880 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CLDN20P56880 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN20P56880 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN20P56880 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.06□□□□□ -0.32
CLDN20P56880 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
CLDN20P56880 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
CLDN20P56880 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN20P56880 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN20P56880 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CLDN20P56880 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN20P56880 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
CLDN20P56880 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
CLDN20P56880 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN20P56880 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN20P56880 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.06□□□□□ -0.32
CLDN20P56880 CYP46A4P-201ENST00000414953 267 ntBASIC13.06□□□□□ -0.32
CLDN20P56880 SPTLC1P5-201ENST00000450718 252 ntBASIC13.06□□□□□ -0.32
CLDN20P56880 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN20P56880 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.06□□□□□ -0.32
CLDN20P56880 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.06□□□□□ -0.32
CLDN20P56880 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.06□□□□□ -0.32
CLDN20P56880 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN20P56880 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CLDN20P56880 AC091544.8-201ENST00000619490 361 ntBASIC13.06□□□□□ -0.32
CLDN20P56880 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.06□□□□□ -0.32
CLDN20P56880 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CLDN20P56880 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN20P56880 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN20P56880 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CLDN20P56880 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
CLDN20P56880 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.06□□□□□ -0.32
CLDN20P56880 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN20P56880 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.06□□□□□ -0.32
CLDN20P56880 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN20P56880 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.06□□□□□ -0.32
CLDN20P56880 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN20P56880 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN20P56880 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN20P56880 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN20P56880 DMBT1P1-203ENST00000636837 4628 ntBASIC13.06□□□□□ -0.32
CLDN20P56880 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLDN20P56880 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CLDN20P56880 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN20P56880 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN20P56880 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.05□□□□□ -0.32
CLDN20P56880 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN20P56880 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN20P56880 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN20P56880 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN20P56880 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN20P56880 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN20P56880 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.05□□□□□ -0.32
CLDN20P56880 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.05□□□□□ -0.32
CLDN20P56880 RN7SL832P-201ENST00000607781 1756 ntBASIC13.05□□□□□ -0.32
CLDN20P56880 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.05□□□□□ -0.32
CLDN20P56880 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.05□□□□□ -0.32
CLDN20P56880 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CLDN20P56880 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.05□□□□□ -0.32
CLDN20P56880 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CLDN20P56880 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN20P56880 RN7SKP214-201ENST00000364208 315 ntBASIC13.05□□□□□ -0.32
CLDN20P56880 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN20P56880 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN20P56880 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CLDN20P56880 ACTG1P2-201ENST00000415776 1125 ntBASIC13.05□□□□□ -0.32
CLDN20P56880 BCYRN1-201ENST00000418539 200 ntBASIC13.05□□□□□ -0.32
CLDN20P56880 ACTG1P11-201ENST00000425411 1125 ntBASIC13.05□□□□□ -0.32
CLDN20P56880 ST13P19-201ENST00000442505 1124 ntBASIC13.05□□□□□ -0.32
CLDN20P56880 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.05□□□□□ -0.32
CLDN20P56880 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.05□□□□□ -0.32
CLDN20P56880 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.05□□□□□ -0.32
CLDN20P56880 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN20P56880 AC003686.1-201ENST00000550956 1034 ntBASIC13.05□□□□□ -0.32
CLDN20P56880 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.05□□□□□ -0.32
CLDN20P56880 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.05□□□□□ -0.32
CLDN20P56880 AC005586.2-201ENST00000563946 837 ntBASIC13.05□□□□□ -0.32
CLDN20P56880 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.05□□□□□ -0.32
CLDN20P56880 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CLDN20P56880 RN7SL774P-201ENST00000577467 290 ntBASIC13.05□□□□□ -0.32
CLDN20P56880 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN20P56880 MIR6074-201ENST00000612054 107 ntBASIC13.05□□□□□ -0.32
CLDN20P56880 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CLDN20P56880 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN20P56880 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.05□□□□□ -0.32
CLDN20P56880 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.05□□□□□ -0.32
CLDN20P56880 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.05□□□□□ -0.32
CLDN20P56880 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.05□□□□□ -0.32
CLDN20P56880 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN20P56880 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN20P56880 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CLDN20P56880 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms