Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.46□□□□□ -0.25
CLK1P49759 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.46□□□□□ -0.25
CLK1P49759 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.46□□□□□ -0.25
CLK1P49759 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
CLK1P49759 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.25
CLK1P49759 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 AC234783.1-201ENST00000441761 496 ntBASIC13.46□□□□□ -0.25
CLK1P49759 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.46□□□□□ -0.25
CLK1P49759 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.46□□□□□ -0.25
CLK1P49759 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.46□□□□□ -0.25
CLK1P49759 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.46□□□□□ -0.25
CLK1P49759 KRT17P8-201ENST00000540749 863 ntBASIC13.46□□□□□ -0.25
CLK1P49759 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.46□□□□□ -0.25
CLK1P49759 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.46□□□□□ -0.25
CLK1P49759 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.46□□□□□ -0.25
CLK1P49759 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CLK1P49759 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CLK1P49759 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLK1P49759 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
CLK1P49759 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
CLK1P49759 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
CLK1P49759 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
CLK1P49759 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLK1P49759 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLK1P49759 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLK1P49759 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.46□□□□□ -0.26
CLK1P49759 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLK1P49759 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLK1P49759 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLK1P49759 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CLK1P49759 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
CLK1P49759 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.45□□□□□ -0.26
CLK1P49759 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CLK1P49759 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CLK1P49759 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.45□□□□□ -0.26
CLK1P49759 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CLK1P49759 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.45□□□□□ -0.26
CLK1P49759 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CLK1P49759 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CLK1P49759 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.45□□□□□ -0.26
CLK1P49759 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
CLK1P49759 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 RN7SKP230-201ENST00000365642 335 ntBASIC13.45□□□□□ -0.26
CLK1P49759 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CLK1P49759 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.45□□□□□ -0.26
CLK1P49759 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 FAM197Y7-201ENST00000432892 766 ntBASIC13.45□□□□□ -0.26
CLK1P49759 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.45□□□□□ -0.26
CLK1P49759 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.45□□□□□ -0.26
CLK1P49759 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.45□□□□□ -0.26
CLK1P49759 AC106820.3-201ENST00000561653 397 ntBASIC13.45□□□□□ -0.26
CLK1P49759 RAB43P1-201ENST00000561790 589 ntBASIC13.45□□□□□ -0.26
CLK1P49759 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.45□□□□□ -0.26
CLK1P49759 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.45□□□□□ -0.26
CLK1P49759 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.45□□□□□ -0.26
CLK1P49759 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.45□□□□□ -0.26
CLK1P49759 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.45□□□□□ -0.26
CLK1P49759 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.45□□□□□ -0.26
CLK1P49759 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
CLK1P49759 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.45□□□□□ -0.26
CLK1P49759 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.45□□□□□ -0.26
CLK1P49759 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.45□□□□□ -0.26
CLK1P49759 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.45□□□□□ -0.26
CLK1P49759 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.45□□□□□ -0.26
CLK1P49759 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC13.45□□□□□ -0.26
CLK1P49759 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.45□□□□□ -0.26
CLK1P49759 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms