Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CEACAM3P40198 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC11.65□□□□□ -0.54
CEACAM3P40198 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
CEACAM3P40198 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
CEACAM3P40198 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
CEACAM3P40198 AC016397.2-201ENST00000624848 1985 ntBASIC11.65□□□□□ -0.55
CEACAM3P40198 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.65□□□□□ -0.55
CEACAM3P40198 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC11.65□□□□□ -0.55
CEACAM3P40198 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC11.64□□□□□ -0.55
CEACAM3P40198 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.64□□□□□ -0.55
CEACAM3P40198 COL6A4P2-202ENST00000504443 2753 ntBASIC11.64□□□□□ -0.55
CEACAM3P40198 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
CEACAM3P40198 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
CEACAM3P40198 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
CEACAM3P40198 AC027601.5-201ENST00000624065 2482 ntBASIC11.64□□□□□ -0.55
CEACAM3P40198 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
CEACAM3P40198 AL022313.4-201ENST00000562756 2046 ntBASIC11.64□□□□□ -0.55
CEACAM3P40198 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC11.64□□□□□ -0.55
CEACAM3P40198 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC11.64□□□□□ -0.55
CEACAM3P40198 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC11.64□□□□□ -0.55
CEACAM3P40198 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
CEACAM3P40198 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
CEACAM3P40198 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
CEACAM3P40198 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
CEACAM3P40198 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
CEACAM3P40198 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 HMGA1P1-201ENST00000415560 1062 ntBASIC11.64□□□□□ -0.55
CEACAM3P40198 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC11.64□□□□□ -0.55
CEACAM3P40198 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC11.64□□□□□ -0.55
CEACAM3P40198 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC11.64□□□□□ -0.55
CEACAM3P40198 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC11.64□□□□□ -0.55
CEACAM3P40198 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
CEACAM3P40198 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC11.64□□□□□ -0.55
CEACAM3P40198 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
CEACAM3P40198 KRT18P15-201ENST00000458108 1291 ntBASIC11.64□□□□□ -0.55
CEACAM3P40198 AKR7A2P1-201ENST00000460134 915 ntBASIC11.64□□□□□ -0.55
CEACAM3P40198 RN7SL530P-201ENST00000485097 298 ntBASIC11.64□□□□□ -0.55
CEACAM3P40198 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC11.64□□□□□ -0.55
CEACAM3P40198 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC11.64□□□□□ -0.55
CEACAM3P40198 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC11.64□□□□□ -0.55
CEACAM3P40198 AC103810.3-201ENST00000583567 96 ntBASIC11.64□□□□□ -0.55
CEACAM3P40198 AL157813.1-201ENST00000612996 587 ntBASIC11.64□□□□□ -0.55
CEACAM3P40198 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC11.64□□□□□ -0.55
CEACAM3P40198 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC11.64□□□□□ -0.55
CEACAM3P40198 UCKL1-AS1-201ENST00000623569 3602 ntBASIC11.64□□□□□ -0.55
CEACAM3P40198 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
CEACAM3P40198 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC11.64□□□□□ -0.55
CEACAM3P40198 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
CEACAM3P40198 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC11.64□□□□□ -0.55
CEACAM3P40198 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.64□□□□□ -0.55
CEACAM3P40198 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
CEACAM3P40198 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.64□□□□□ -0.55
CEACAM3P40198 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
CEACAM3P40198 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
CEACAM3P40198 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
CEACAM3P40198 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
CEACAM3P40198 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms