Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LTBRP36941 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBRP36941 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBRP36941 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBRP36941 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LTBRP36941 TPT1P11-201ENST00000458482 498 ntBASIC14.23□□□□□ -0.13
LTBRP36941 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC14.23□□□□□ -0.13
LTBRP36941 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC14.23□□□□□ -0.13
LTBRP36941 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC14.23□□□□□ -0.13
LTBRP36941 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LTBRP36941 AC091691.1-201ENST00000583587 1018 ntBASIC14.23□□□□□ -0.13
LTBRP36941 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC14.23□□□□□ -0.13
LTBRP36941 BOLA3P2-201ENST00000586496 323 ntBASIC14.23□□□□□ -0.13
LTBRP36941 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
LTBRP36941 AP006248.1-201ENST00000610471 67 ntBASIC14.23□□□□□ -0.13
LTBRP36941 AC015813.5-201ENST00000624641 1514 ntBASIC14.23□□□□□ -0.13
LTBRP36941 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LTBRP36941 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.23□□□□□ -0.13
LTBRP36941 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
LTBRP36941 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LTBRP36941 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBRP36941 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBRP36941 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBRP36941 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LTBRP36941 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LTBRP36941 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC14.23□□□□□ -0.13
LTBRP36941 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
LTBRP36941 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBRP36941 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LTBRP36941 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
LTBRP36941 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
LTBRP36941 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.22□□□□□ -0.13
LTBRP36941 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LTBRP36941 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.22□□□□□ -0.13
LTBRP36941 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LTBRP36941 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 AC022532.1-201ENST00000624563 1728 ntBASIC14.22□□□□□ -0.13
LTBRP36941 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.22□□□□□ -0.13
LTBRP36941 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.22□□□□□ -0.13
LTBRP36941 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC14.22□□□□□ -0.13
LTBRP36941 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC14.22□□□□□ -0.13
LTBRP36941 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC14.22□□□□□ -0.13
LTBRP36941 ALDOAP1-201ENST00000491506 1078 ntBASIC14.22□□□□□ -0.13
LTBRP36941 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC14.22□□□□□ -0.13
LTBRP36941 KRT18P42-201ENST00000505048 1255 ntBASIC14.22□□□□□ -0.13
LTBRP36941 AC114812.4-201ENST00000506676 757 ntBASIC14.22□□□□□ -0.13
LTBRP36941 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC14.22□□□□□ -0.13
LTBRP36941 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC14.22□□□□□ -0.13
LTBRP36941 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC14.22□□□□□ -0.13
LTBRP36941 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
LTBRP36941 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LTBRP36941 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LTBRP36941 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.22□□□□□ -0.13
LTBRP36941 HSPA8P5-201ENST00000456928 2069 ntBASIC14.22□□□□□ -0.13
LTBRP36941 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
LTBRP36941 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.22□□□□□ -0.13
LTBRP36941 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC14.22□□□□□ -0.13
LTBRP36941 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBRP36941 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC14.22□□□□□ -0.13
LTBRP36941 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC14.22□□□□□ -0.13
LTBRP36941 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC14.22□□□□□ -0.13
LTBRP36941 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LTBRP36941 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LTBRP36941 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LTBRP36941 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LTBRP36941 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LTBRP36941 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC14.21□□□□□ -0.13
LTBRP36941 AC245140.2-201ENST00000624054 1939 ntBASIC14.21□□□□□ -0.13
LTBRP36941 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LTBRP36941 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LTBRP36941 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
LTBRP36941 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC14.21□□□□□ -0.13
LTBRP36941 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.21□□□□□ -0.13
LTBRP36941 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.21□□□□□ -0.13
LTBRP36941 SIGLEC20P-201ENST00000595243 1311 ntBASIC14.21□□□□□ -0.13
LTBRP36941 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LTBRP36941 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.21□□□□□ -0.13
LTBRP36941 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms