Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM23P36406 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRIM23P36406 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC13.9□□□□□ -0.18
TRIM23P36406 AC092978.1-202ENST00000637590 1327 ntBASIC13.9□□□□□ -0.18
TRIM23P36406 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM23P36406 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TRIM23P36406 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.9□□□□□ -0.18
TRIM23P36406 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM23P36406 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM23P36406 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRIM23P36406 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM23P36406 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM23P36406 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM23P36406 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM23P36406 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRIM23P36406 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRIM23P36406 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM23P36406 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.9□□□□□ -0.18
TRIM23P36406 IGF1-203ENST00000392904 761 ntTSL 5 BASIC13.9□□□□□ -0.18
TRIM23P36406 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.9□□□□□ -0.18
TRIM23P36406 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC13.9□□□□□ -0.18
TRIM23P36406 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC13.9□□□□□ -0.18
TRIM23P36406 CSNK1G2P1-201ENST00000442675 955 ntBASIC13.9□□□□□ -0.18
TRIM23P36406 GRPEL2P1-201ENST00000453145 339 ntBASIC13.9□□□□□ -0.18
TRIM23P36406 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRIM23P36406 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13.9□□□□□ -0.18
TRIM23P36406 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC13.9□□□□□ -0.18
TRIM23P36406 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM23P36406 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC13.9□□□□□ -0.18
TRIM23P36406 MIR3180-2-201ENST00000581748 88 ntBASIC13.9□□□□□ -0.18
TRIM23P36406 RN7SL470P-201ENST00000583069 259 ntBASIC13.9□□□□□ -0.18
TRIM23P36406 AC140113.1-201ENST00000603467 169 ntBASIC13.9□□□□□ -0.18
TRIM23P36406 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC13.9□□□□□ -0.18
TRIM23P36406 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
TRIM23P36406 HPX-213ENST00000615166 826 ntTSL 5 BASIC13.9□□□□□ -0.18
TRIM23P36406 SNX1-214ENST00000625244 324 ntTSL 5 BASIC13.9□□□□□ -0.18
TRIM23P36406 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRIM23P36406 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.9□□□□□ -0.18
TRIM23P36406 AC019109.1-201ENST00000401725 1874 ntBASIC13.9□□□□□ -0.18
TRIM23P36406 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TRIM23P36406 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.9□□□□□ -0.18
TRIM23P36406 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.9□□□□□ -0.18
TRIM23P36406 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRIM23P36406 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.9□□□□□ -0.18
TRIM23P36406 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.9□□□□□ -0.18
TRIM23P36406 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.9□□□□□ -0.19
TRIM23P36406 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TRIM23P36406 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TRIM23P36406 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TRIM23P36406 AC138761.6-201ENST00000583997 1423 ntBASIC13.9□□□□□ -0.19
TRIM23P36406 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TRIM23P36406 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 AC005840.4-201ENST00000541242 2494 ntBASIC13.89□□□□□ -0.19
TRIM23P36406 AC027601.5-201ENST00000624065 2482 ntBASIC13.89□□□□□ -0.19
TRIM23P36406 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.89□□□□□ -0.19
TRIM23P36406 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.89□□□□□ -0.19
TRIM23P36406 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.89□□□□□ -0.19
TRIM23P36406 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRIM23P36406 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
TRIM23P36406 RCC2P1-201ENST00000452257 1476 ntBASIC13.89□□□□□ -0.19
TRIM23P36406 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.89□□□□□ -0.19
TRIM23P36406 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRIM23P36406 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.89□□□□□ -0.19
TRIM23P36406 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM23P36406 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms