Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
CKS2P33552 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS2P33552 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC10.48□□□□□ -0.73
CKS2P33552 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC10.47□□□□□ -0.73
CKS2P33552 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS2P33552 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS2P33552 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CKS2P33552 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC10.47□□□□□ -0.73
CKS2P33552 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS2P33552 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
CKS2P33552 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC10.47□□□□□ -0.73
CKS2P33552 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS2P33552 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
CKS2P33552 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS2P33552 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CKS2P33552 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
CKS2P33552 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
CKS2P33552 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC10.47□□□□□ -0.73
CKS2P33552 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
CKS2P33552 STX16-202ENST00000355957 4897 ntTSL 2 BASIC10.47□□□□□ -0.73
CKS2P33552 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS2P33552 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC10.47□□□□□ -0.73
CKS2P33552 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS2P33552 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC10.47□□□□□ -0.73
CKS2P33552 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS2P33552 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC10.47□□□□□ -0.73
CKS2P33552 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS2P33552 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CKS2P33552 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CKS2P33552 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC10.47□□□□□ -0.73
CKS2P33552 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC10.47□□□□□ -0.73
CKS2P33552 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS2P33552 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS2P33552 PI4KAP2-201ENST00000360806 2080 ntBASIC10.47□□□□□ -0.73
CKS2P33552 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
CKS2P33552 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS2P33552 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
CKS2P33552 B9D1-203ENST00000395615 805 ntTSL 3 BASIC10.47□□□□□ -0.73
CKS2P33552 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC10.47□□□□□ -0.73
CKS2P33552 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC10.47□□□□□ -0.73
CKS2P33552 AC009078.2-202ENST00000463353 338 ntBASIC10.47□□□□□ -0.73
CKS2P33552 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CKS2P33552 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC10.47□□□□□ -0.73
CKS2P33552 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC10.47□□□□□ -0.73
CKS2P33552 AC092865.5-201ENST00000545435 363 ntBASIC10.47□□□□□ -0.73
CKS2P33552 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC10.47□□□□□ -0.73
CKS2P33552 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC10.47□□□□□ -0.73
CKS2P33552 AC004835.2-201ENST00000603762 682 ntBASIC10.47□□□□□ -0.73
CKS2P33552 AC104506.1-201ENST00000609247 429 ntBASIC10.47□□□□□ -0.73
CKS2P33552 COQ4-205ENST00000609948 956 ntTSL 2 BASIC10.47□□□□□ -0.73
CKS2P33552 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC10.47□□□□□ -0.73
CKS2P33552 AC009093.7-201ENST00000623853 1223 ntBASIC10.47□□□□□ -0.73
CKS2P33552 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC10.47□□□□□ -0.73
CKS2P33552 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CKS2P33552 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CKS2P33552 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CKS2P33552 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
CKS2P33552 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CKS2P33552 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS2P33552 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS2P33552 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC10.47□□□□□ -0.73
CKS2P33552 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
CKS2P33552 AL590440.2-201ENST00000641973 1595 ntBASIC10.47□□□□□ -0.73
CKS2P33552 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC10.47□□□□□ -0.73
CKS2P33552 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC10.47□□□□□ -0.73
CKS2P33552 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CKS2P33552 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS2P33552 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS2P33552 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CKS2P33552 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
CKS2P33552 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC10.46□□□□□ -0.73
CKS2P33552 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC10.46□□□□□ -0.73
CKS2P33552 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CKS2P33552 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CKS2P33552 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS2P33552 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS2P33552 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS2P33552 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
CKS2P33552 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS2P33552 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CKS2P33552 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS2P33552 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS2P33552 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC10.46□□□□□ -0.73
CKS2P33552 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CKS2P33552 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CKS2P33552 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
CKS2P33552 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CKS2P33552 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS2P33552 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS2P33552 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
CKS2P33552 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS2P33552 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS2P33552 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS2P33552 RNU1-114P-201ENST00000365297 166 ntBASIC10.46□□□□□ -0.73
CKS2P33552 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
CKS2P33552 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CKS2P33552 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC10.46□□□□□ -0.73
CKS2P33552 MIR1224-201ENST00000408193 85 ntBASIC10.46□□□□□ -0.73
CKS2P33552 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
CKS2P33552 ARSEP1-201ENST00000420443 635 ntBASIC10.46□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms