Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL1P22362 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL1P22362 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
CCL1P22362 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CCL1P22362 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCL1P22362 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCL1P22362 DLX4-206ENST00000611342 1662 ntBASIC12.17□□□□□ -0.46
CCL1P22362 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.17□□□□□ -0.46
CCL1P22362 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL1P22362 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.17□□□□□ -0.46
CCL1P22362 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL1P22362 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCL1P22362 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.17□□□□□ -0.46
CCL1P22362 FAM21FP-201ENST00000426241 1131 ntBASIC12.17□□□□□ -0.46
CCL1P22362 TSPY25P-201ENST00000429463 745 ntBASIC12.17□□□□□ -0.46
CCL1P22362 RN7SL277P-201ENST00000481521 288 ntBASIC12.17□□□□□ -0.46
CCL1P22362 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.17□□□□□ -0.46
CCL1P22362 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.17□□□□□ -0.46
CCL1P22362 AC009779.1-201ENST00000551138 283 ntBASIC12.17□□□□□ -0.46
CCL1P22362 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.17□□□□□ -0.46
CCL1P22362 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.17□□□□□ -0.46
CCL1P22362 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.17□□□□□ -0.46
CCL1P22362 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.17□□□□□ -0.46
CCL1P22362 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.17□□□□□ -0.46
CCL1P22362 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC12.17□□□□□ -0.46
CCL1P22362 RN7SL455P-201ENST00000580629 282 ntBASIC12.17□□□□□ -0.46
CCL1P22362 RN7SL163P-201ENST00000583100 276 ntBASIC12.17□□□□□ -0.46
CCL1P22362 MIR3188-201ENST00000583494 85 ntBASIC12.17□□□□□ -0.46
CCL1P22362 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
CCL1P22362 AC010328.2-201ENST00000597698 1111 ntBASIC12.17□□□□□ -0.46
CCL1P22362 AL356740.1-201ENST00000602192 1297 ntBASIC12.17□□□□□ -0.46
CCL1P22362 AL132994.2-201ENST00000603120 687 ntBASIC12.17□□□□□ -0.46
CCL1P22362 AC090164.2-201ENST00000611487 516 ntBASIC12.17□□□□□ -0.46
CCL1P22362 AL157813.1-201ENST00000612996 587 ntBASIC12.17□□□□□ -0.46
CCL1P22362 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL1P22362 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CCL1P22362 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL1P22362 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CCL1P22362 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCL1P22362 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL1P22362 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.17□□□□□ -0.46
CCL1P22362 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL1P22362 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.17□□□□□ -0.46
CCL1P22362 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CCL1P22362 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL1P22362 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CCL1P22362 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL1P22362 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.17□□□□□ -0.46
CCL1P22362 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.17□□□□□ -0.46
CCL1P22362 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCL1P22362 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.16□□□□□ -0.46
CCL1P22362 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.16□□□□□ -0.46
CCL1P22362 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.16□□□□□ -0.46
CCL1P22362 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.16□□□□□ -0.46
CCL1P22362 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.16□□□□□ -0.46
CCL1P22362 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.16□□□□□ -0.46
CCL1P22362 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.16□□□□□ -0.46
CCL1P22362 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CCL1P22362 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.16□□□□□ -0.46
CCL1P22362 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.16□□□□□ -0.46
CCL1P22362 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.16□□□□□ -0.46
CCL1P22362 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.16□□□□□ -0.46
CCL1P22362 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.16□□□□□ -0.46
CCL1P22362 AC022210.1-201ENST00000449856 793 ntBASIC12.16□□□□□ -0.46
CCL1P22362 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.16□□□□□ -0.46
CCL1P22362 FAM86HP-204ENST00000513466 959 ntBASIC12.16□□□□□ -0.46
CCL1P22362 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.16□□□□□ -0.46
CCL1P22362 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.16□□□□□ -0.46
CCL1P22362 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.16□□□□□ -0.46
CCL1P22362 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.16□□□□□ -0.46
CCL1P22362 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC12.16□□□□□ -0.46
CCL1P22362 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.16□□□□□ -0.46
CCL1P22362 AC133552.6-201ENST00000613406 534 ntBASIC12.16□□□□□ -0.46
CCL1P22362 AC009542.2-202ENST00000619004 1067 ntBASIC12.16□□□□□ -0.46
CCL1P22362 AL136295.7-201ENST00000619226 1200 ntBASIC12.16□□□□□ -0.46
CCL1P22362 COX11-210ENST00000639671 696 ntBASIC12.16□□□□□ -0.46
CCL1P22362 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.16□□□□□ -0.46
CCL1P22362 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CCL1P22362 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CCL1P22362 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCL1P22362 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms