Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.05□□□□□ -0.16
COL6A2P12110 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
COL6A2P12110 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
COL6A2P12110 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL6A2P12110 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL6A2P12110 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL6A2P12110 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL6A2P12110 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL6A2P12110 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL6A2P12110 AC020917.4-201ENST00000623994 1999 ntBASIC14.05□□□□□ -0.16
COL6A2P12110 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
COL6A2P12110 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL6A2P12110 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.05□□□□□ -0.16
COL6A2P12110 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL6A2P12110 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.05□□□□□ -0.16
COL6A2P12110 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL6A2P12110 MIR497HG-202ENST00000572453 3838 ntBASIC14.05□□□□□ -0.16
COL6A2P12110 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL6A2P12110 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL6A2P12110 PEG13-201ENST00000631594 5667 ntBASIC14.05□□□□□ -0.16
COL6A2P12110 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.05□□□□□ -0.16
COL6A2P12110 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
COL6A2P12110 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.05□□□□□ -0.16
COL6A2P12110 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL6A2P12110 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 AL445250.1-201ENST00000641671 2259 ntBASIC14.04□□□□□ -0.16
COL6A2P12110 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
COL6A2P12110 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 AC108024.1-201ENST00000626286 1721 ntBASIC14.04□□□□□ -0.16
COL6A2P12110 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.04□□□□□ -0.16
COL6A2P12110 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC14.04□□□□□ -0.16
COL6A2P12110 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
COL6A2P12110 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.04□□□□□ -0.16
COL6A2P12110 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
COL6A2P12110 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
COL6A2P12110 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
COL6A2P12110 AL354877.1-201ENST00000424412 413 ntBASIC14.04□□□□□ -0.16
COL6A2P12110 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 AC092580.1-201ENST00000433998 658 ntBASIC14.04□□□□□ -0.16
COL6A2P12110 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
COL6A2P12110 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.04□□□□□ -0.16
COL6A2P12110 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.04□□□□□ -0.16
COL6A2P12110 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.04□□□□□ -0.16
COL6A2P12110 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.04□□□□□ -0.16
COL6A2P12110 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
COL6A2P12110 AC005962.1-201ENST00000584100 773 ntBASIC14.04□□□□□ -0.16
COL6A2P12110 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.04□□□□□ -0.16
COL6A2P12110 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.04□□□□□ -0.16
COL6A2P12110 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.04□□□□□ -0.16
COL6A2P12110 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
COL6A2P12110 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.04□□□□□ -0.16
COL6A2P12110 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
COL6A2P12110 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
COL6A2P12110 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.04□□□□□ -0.16
COL6A2P12110 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
COL6A2P12110 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL6A2P12110 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.04□□□□□ -0.16
COL6A2P12110 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL6A2P12110 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.03□□□□□ -0.16
COL6A2P12110 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.03□□□□□ -0.16
COL6A2P12110 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL6A2P12110 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC14.03□□□□□ -0.16
COL6A2P12110 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL6A2P12110 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL6A2P12110 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL6A2P12110 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
COL6A2P12110 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL6A2P12110 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL6A2P12110 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL6A2P12110 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
COL6A2P12110 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
COL6A2P12110 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms