Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.82□□□□□ -0.04
RB1P06400 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 TCAF2P1-201ENST00000291129 2421 ntBASIC14.82□□□□□ -0.04
RB1P06400 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.82□□□□□ -0.04
RB1P06400 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC14.82□□□□□ -0.04
RB1P06400 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RB1P06400 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RB1P06400 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RB1P06400 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RB1P06400 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RB1P06400 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RB1P06400 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.81□□□□□ -0.04
RB1P06400 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RB1P06400 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
RB1P06400 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
RB1P06400 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RB1P06400 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.81□□□□□ -0.04
RB1P06400 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RB1P06400 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RB1P06400 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RB1P06400 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RB1P06400 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RB1P06400 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RB1P06400 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RB1P06400 CTSL-202ENST00000342020 933 ntTSL 2 BASIC14.81□□□□□ -0.04
RB1P06400 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RB1P06400 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC14.81□□□□□ -0.04
RB1P06400 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RB1P06400 HLA-DMA-202ENST00000395303 1007 ntBASIC14.81□□□□□ -0.04
RB1P06400 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC14.81□□□□□ -0.04
RB1P06400 EEF1DP5-201ENST00000431410 772 ntBASIC14.81□□□□□ -0.04
RB1P06400 SOD2-205ENST00000444946 917 ntTSL 2 BASIC14.81□□□□□ -0.04
RB1P06400 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.81□□□□□ -0.04
RB1P06400 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC14.81□□□□□ -0.04
RB1P06400 HNRNPA1P42-201ENST00000458678 957 ntBASIC14.81□□□□□ -0.04
RB1P06400 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC14.81□□□□□ -0.04
RB1P06400 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC14.81□□□□□ -0.04
RB1P06400 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC14.81□□□□□ -0.04
RB1P06400 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC14.81□□□□□ -0.04
RB1P06400 AC120498.7-201ENST00000562876 330 ntBASIC14.81□□□□□ -0.04
RB1P06400 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC14.81□□□□□ -0.04
RB1P06400 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RB1P06400 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RB1P06400 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.81□□□□□ -0.04
RB1P06400 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.81□□□□□ -0.04
RB1P06400 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RB1P06400 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RB1P06400 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.81□□□□□ -0.04
RB1P06400 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RB1P06400 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
RB1P06400 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RB1P06400 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.81□□□□□ -0.04
RB1P06400 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RB1P06400 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RB1P06400 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RB1P06400 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.81□□□□□ -0.04
RB1P06400 AC008536.3-201ENST00000623282 1599 ntBASIC14.81□□□□□ -0.04
RB1P06400 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RB1P06400 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RB1P06400 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RB1P06400 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RB1P06400 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RB1P06400 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RB1P06400 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RB1P06400 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RB1P06400 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RB1P06400 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RB1P06400 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.8□□□□□ -0.04
RB1P06400 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RB1P06400 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RB1P06400 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RB1P06400 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RB1P06400 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RB1P06400 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
RB1P06400 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RB1P06400 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC14.8□□□□□ -0.04
RB1P06400 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC14.8□□□□□ -0.04
RB1P06400 HDGF-202ENST00000368206 960 ntTSL 5 BASIC14.8□□□□□ -0.04
RB1P06400 USP17L6P-201ENST00000382470 1197 ntBASIC14.8□□□□□ -0.04
RB1P06400 AL157823.1-201ENST00000403727 628 ntBASIC14.8□□□□□ -0.04
RB1P06400 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC14.8□□□□□ -0.04
RB1P06400 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC14.8□□□□□ -0.04
RB1P06400 AC133141.1-201ENST00000443015 339 ntBASIC14.8□□□□□ -0.04
RB1P06400 HIST1H2APS2-201ENST00000454426 370 ntBASIC14.8□□□□□ -0.04
RB1P06400 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC14.8□□□□□ -0.04
RB1P06400 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC14.8□□□□□ -0.04
RB1P06400 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC14.8□□□□□ -0.04
RB1P06400 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC14.8□□□□□ -0.04
RB1P06400 FAM187B2P-201ENST00000577135 713 ntBASIC14.8□□□□□ -0.04
RB1P06400 MIR4746-201ENST00000579802 71 ntBASIC14.8□□□□□ -0.04
RB1P06400 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC14.8□□□□□ -0.04
RB1P06400 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC14.8□□□□□ -0.04
RB1P06400 AC048382.6-201ENST00000621980 1223 ntBASIC14.8□□□□□ -0.04
RB1P06400 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RB1P06400 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms