Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 OLFML1-204ENST00000530135 1620 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
USH2AO75445 AC011498.7-201ENST00000624986 2027 ntBASIC6.07□□□□□ -1.44
USH2AO75445 ACTBP1-201ENST00000417985 1113 ntBASIC6.07□□□□□ -1.44
USH2AO75445 HLA-DQB3-203ENST00000425319 356 ntBASIC6.07□□□□□ -1.44
USH2AO75445 TUSC8-201ENST00000432701 978 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USH2AO75445 YBX1P3-201ENST00000468366 909 ntBASIC6.07□□□□□ -1.44
USH2AO75445 RN7SL452P-201ENST00000482923 291 ntBASIC6.07□□□□□ -1.44
USH2AO75445 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC6.07□□□□□ -1.44
USH2AO75445 COPZ1-206ENST00000549043 1232 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USH2AO75445 LINC00662-204ENST00000588027 562 ntTSL 5 BASIC6.07□□□□□ -1.44
USH2AO75445 TRMT112P6-201ENST00000599234 372 ntBASIC6.07□□□□□ -1.44
USH2AO75445 AC012186.3-201ENST00000623850 485 ntBASIC6.07□□□□□ -1.44
USH2AO75445 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
USH2AO75445 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
USH2AO75445 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USH2AO75445 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USH2AO75445 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USH2AO75445 RACK1-227ENST00000512805 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USH2AO75445 GSN-215ENST00000545652 2428 ntTSL 2 BASIC6.07□□□□□ -1.44
USH2AO75445 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
USH2AO75445 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
USH2AO75445 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
USH2AO75445 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC6.07□□□□□ -1.44
USH2AO75445 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC6.07□□□□□ -1.44
USH2AO75445 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC6.07□□□□□ -1.44
USH2AO75445 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC6.07□□□□□ -1.44
USH2AO75445 RN7SKP245-201ENST00000364025 320 ntBASIC6.07□□□□□ -1.44
USH2AO75445 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC6.07□□□□□ -1.44
USH2AO75445 AC104212.2-201ENST00000478813 628 ntBASIC6.07□□□□□ -1.44
USH2AO75445 ALG1L14P-201ENST00000514230 434 ntBASIC6.07□□□□□ -1.44
USH2AO75445 RN7SL134P-201ENST00000579756 303 ntBASIC6.07□□□□□ -1.44
USH2AO75445 RN7SL750P-201ENST00000582814 238 ntBASIC6.07□□□□□ -1.44
USH2AO75445 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USH2AO75445 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USH2AO75445 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
USH2AO75445 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC6.07□□□□□ -1.44
USH2AO75445 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USH2AO75445 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
USH2AO75445 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
USH2AO75445 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
USH2AO75445 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC6.07□□□□□ -1.44
USH2AO75445 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USH2AO75445 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USH2AO75445 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC6.07□□□□□ -1.44
USH2AO75445 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC6.07□□□□□ -1.44
USH2AO75445 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC6.07□□□□□ -1.44
USH2AO75445 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC6.07□□□□□ -1.44
USH2AO75445 HPRT1-201ENST00000298556 1407 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USH2AO75445 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
USH2AO75445 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC6.07□□□□□ -1.44
USH2AO75445 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC6.06□□□□□ -1.44
USH2AO75445 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC6.06□□□□□ -1.44
USH2AO75445 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC6.06□□□□□ -1.44
USH2AO75445 OR2A15P-201ENST00000463814 900 ntBASIC6.06□□□□□ -1.44
USH2AO75445 RN7SL229P-201ENST00000495651 299 ntBASIC6.06□□□□□ -1.44
USH2AO75445 TMEM161B-AS1-204ENST00000504636 1039 ntTSL 2 BASIC6.06□□□□□ -1.44
USH2AO75445 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 MIR4326-201ENST00000582203 59 ntBASIC6.06□□□□□ -1.44
USH2AO75445 AL589743.3-201ENST00000604121 517 ntBASIC6.06□□□□□ -1.44
USH2AO75445 TTC28-AS1_1.1-201ENST00000614690 162 ntBASIC6.06□□□□□ -1.44
USH2AO75445 AC138430.2-201ENST00000624068 504 ntBASIC6.06□□□□□ -1.44
USH2AO75445 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC6.06□□□□□ -1.44
USH2AO75445 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
USH2AO75445 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC6.06□□□□□ -1.44
USH2AO75445 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 NBEAP3-201ENST00000420638 1493 ntBASIC6.06□□□□□ -1.44
USH2AO75445 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC6.06□□□□□ -1.44
USH2AO75445 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC6.06□□□□□ -1.44
USH2AO75445 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
USH2AO75445 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC6.06□□□□□ -1.44
USH2AO75445 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
USH2AO75445 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 APOC3-201ENST00000227667 550 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 GSTA4-201ENST00000370959 793 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
USH2AO75445 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
USH2AO75445 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC6.06□□□□□ -1.44
USH2AO75445 AQP7-207ENST00000447660 998 ntTSL 2 BASIC6.06□□□□□ -1.44
USH2AO75445 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC6.06□□□□□ -1.44
USH2AO75445 AC022447.2-201ENST00000509750 543 ntTSL 3 BASIC6.06□□□□□ -1.44
USH2AO75445 AC108082.1-201ENST00000510857 331 ntBASIC6.06□□□□□ -1.44
USH2AO75445 COQ10BP2-201ENST00000513804 724 ntBASIC6.06□□□□□ -1.44
USH2AO75445 SLC25A5P6-201ENST00000515328 886 ntBASIC6.06□□□□□ -1.44
USH2AO75445 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC6.06□□□□□ -1.44
USH2AO75445 AC134312.5-202ENST00000562705 756 ntTSL 3 BASIC6.06□□□□□ -1.44
USH2AO75445 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC6.06□□□□□ -1.44
USH2AO75445 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms