Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 HIST2H2BA-201ENST00000412169 381 ntBASIC14.24□□□□□ -0.13
SMAD6O43541 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.24□□□□□ -0.13
SMAD6O43541 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.24□□□□□ -0.13
SMAD6O43541 RPL18AP3-201ENST00000462885 528 ntBASIC14.24□□□□□ -0.13
SMAD6O43541 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.24□□□□□ -0.13
SMAD6O43541 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.24□□□□□ -0.13
SMAD6O43541 MIR4265-201ENST00000582152 99 ntBASIC14.24□□□□□ -0.13
SMAD6O43541 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.24□□□□□ -0.13
SMAD6O43541 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC14.24□□□□□ -0.13
SMAD6O43541 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.24□□□□□ -0.13
SMAD6O43541 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SMAD6O43541 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.24□□□□□ -0.13
SMAD6O43541 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SMAD6O43541 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 AC004554.1-201ENST00000422830 1468 ntBASIC14.24□□□□□ -0.13
SMAD6O43541 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SMAD6O43541 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SMAD6O43541 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SMAD6O43541 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMAD6O43541 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.23□□□□□ -0.13
SMAD6O43541 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SMAD6O43541 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.23□□□□□ -0.13
SMAD6O43541 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SMAD6O43541 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC14.23□□□□□ -0.13
SMAD6O43541 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC14.23□□□□□ -0.13
SMAD6O43541 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.23□□□□□ -0.13
SMAD6O43541 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.23□□□□□ -0.13
SMAD6O43541 PDXDC2P-206ENST00000534700 1315 ntBASIC14.23□□□□□ -0.13
SMAD6O43541 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
SMAD6O43541 AC008620.2-201ENST00000510294 1569 ntBASIC14.23□□□□□ -0.13
SMAD6O43541 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SMAD6O43541 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC14.23□□□□□ -0.13
SMAD6O43541 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SMAD6O43541 RPSAP31-201ENST00000416648 895 ntBASIC14.23□□□□□ -0.13
SMAD6O43541 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.23□□□□□ -0.13
SMAD6O43541 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.23□□□□□ -0.13
SMAD6O43541 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.23□□□□□ -0.13
SMAD6O43541 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC14.23□□□□□ -0.13
SMAD6O43541 RN7SL564P-201ENST00000496309 250 ntBASIC14.23□□□□□ -0.13
SMAD6O43541 RNA5SP417-201ENST00000516459 108 ntBASIC14.23□□□□□ -0.13
SMAD6O43541 TMCO5B-205ENST00000530020 894 ntBASIC14.23□□□□□ -0.13
SMAD6O43541 AP000911.2-201ENST00000534330 502 ntBASIC14.23□□□□□ -0.13
SMAD6O43541 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 NPM1P43-201ENST00000558669 786 ntBASIC14.23□□□□□ -0.13
SMAD6O43541 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SMAD6O43541 AC007952.4-201ENST00000573866 637 ntBASIC14.23□□□□□ -0.13
SMAD6O43541 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
SMAD6O43541 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.23□□□□□ -0.13
SMAD6O43541 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC14.23□□□□□ -0.13
SMAD6O43541 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.23□□□□□ -0.13
SMAD6O43541 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.23□□□□□ -0.13
SMAD6O43541 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 AC061965.1-201ENST00000560524 1465 ntBASIC14.23□□□□□ -0.13
SMAD6O43541 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SMAD6O43541 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.23□□□□□ -0.13
SMAD6O43541 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMAD6O43541 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
SMAD6O43541 AC019109.1-201ENST00000401725 1874 ntBASIC14.23□□□□□ -0.13
SMAD6O43541 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SMAD6O43541 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SMAD6O43541 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.23□□□□□ -0.13
SMAD6O43541 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms