Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 AC027369.6-201ENST00000525520 931 ntBASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 AC068587.3-201ENST00000526613 355 ntBASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 AC138466.3-201ENST00000619983 221 ntBASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 USP47-202ENST00000339865 7775 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 MIR1224-201ENST00000408193 85 ntBASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 MARK2P16-201ENST00000605714 1723 ntBASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 PTPRVP-205ENST00000641549 5067 ntBASIC14.4□□□□□ -0.1
HMGB1P1B2RPK0 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGB1P1B2RPK0 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMGB1P1B2RPK0 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC14.39□□□□□ -0.11
HMGB1P1B2RPK0 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGB1P1B2RPK0 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGB1P1B2RPK0 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
HMGB1P1B2RPK0 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC14.39□□□□□ -0.11
HMGB1P1B2RPK0 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.39□□□□□ -0.11
HMGB1P1B2RPK0 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC14.39□□□□□ -0.11
HMGB1P1B2RPK0 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HMGB1P1B2RPK0 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGB1P1B2RPK0 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGB1P1B2RPK0 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGB1P1B2RPK0 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC14.39□□□□□ -0.11
HMGB1P1B2RPK0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMGB1P1B2RPK0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms