Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 AL513477.1-201ENST00000602865 2407 ntBASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 SERF2-205ENST00000403425 690 ntTSL 2 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 RBMXP1-201ENST00000408004 1191 ntBASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 RPL13AP5-201ENST00000439189 612 ntBASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 MTHFD2P7-201ENST00000483867 983 ntBASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 RPL29P2-202ENST00000498671 657 ntBASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 AC114812.4-201ENST00000506676 757 ntBASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 IGHV1OR16-3-201ENST00000568138 205 ntBASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 AC136475.9-201ENST00000605240 497 ntBASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 MIR6074-201ENST00000612054 107 ntBASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 AL158032.2-201ENST00000616818 195 ntBASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM88BA6NKF7 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 RPL21P135-201ENST00000442539 791 ntBASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 EEF1GP1-201ENST00000457231 1299 ntBASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 AP001102.1-201ENST00000528959 409 ntBASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM88BA6NKF7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
TMEM88BA6NKF7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM88BA6NKF7 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC16.02■□□□□ 0.15
TMEM88BA6NKF7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM88BA6NKF7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
TMEM88BA6NKF7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
TMEM88BA6NKF7 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM88BA6NKF7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM88BA6NKF7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM88BA6NKF7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM88BA6NKF7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.02■□□□□ 0.15
TMEM88BA6NKF7 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM88BA6NKF7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.02■□□□□ 0.15
TMEM88BA6NKF7 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
TMEM88BA6NKF7 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.02■□□□□ 0.15
TMEM88BA6NKF7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 KRT8P42-201ENST00000405771 1399 ntBASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 AC008038.1-201ENST00000634247 1314 ntBASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TMEM88BA6NKF7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms