Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SATB2Q9UPW6 CYP4F23P-201ENST00000593402 1579 ntBASIC14.02□□□□□ -0.16
SATB2Q9UPW6 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
SATB2Q9UPW6 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 AL035414.1-201ENST00000451327 857 ntBASIC14.02□□□□□ -0.17
SATB2Q9UPW6 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 RBM8B-201ENST00000555532 525 ntBASIC14.02□□□□□ -0.17
SATB2Q9UPW6 DNM1P30-201ENST00000563586 452 ntBASIC14.02□□□□□ -0.17
SATB2Q9UPW6 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 GMFG-209ENST00000600322 622 ntTSL 5 BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 AC005632.3-201ENST00000605544 308 ntBASIC14.02□□□□□ -0.17
SATB2Q9UPW6 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 AC133540.1-201ENST00000620845 1019 ntBASIC14.02□□□□□ -0.17
SATB2Q9UPW6 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 AC140479.7-201ENST00000636301 2332 ntBASIC14.02□□□□□ -0.17
SATB2Q9UPW6 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SATB2Q9UPW6 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 MTHFR-210ENST00000641407 2387 ntBASIC14.01□□□□□ -0.17
SATB2Q9UPW6 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 AL627389.1-201ENST00000413508 1182 ntBASIC14.01□□□□□ -0.17
SATB2Q9UPW6 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 PHBP15-201ENST00000574228 665 ntBASIC14.01□□□□□ -0.17
SATB2Q9UPW6 MIR4649-201ENST00000582839 64 ntBASIC14.01□□□□□ -0.17
SATB2Q9UPW6 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 BX088702.1-201ENST00000610784 235 ntBASIC14.01□□□□□ -0.17
SATB2Q9UPW6 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 LINC01165-201ENST00000445190 1623 ntBASIC14.01□□□□□ -0.17
SATB2Q9UPW6 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SATB2Q9UPW6 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14□□□□□ -0.17
SATB2Q9UPW6 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SATB2Q9UPW6 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SATB2Q9UPW6 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SATB2Q9UPW6 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SATB2Q9UPW6 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14□□□□□ -0.17
SATB2Q9UPW6 AC027601.5-201ENST00000624065 2482 ntBASIC14□□□□□ -0.17
SATB2Q9UPW6 SLC6A6P1-201ENST00000413933 1850 ntBASIC14□□□□□ -0.17
SATB2Q9UPW6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
SATB2Q9UPW6 KRT18P9-201ENST00000604826 1300 ntBASIC14□□□□□ -0.17
SATB2Q9UPW6 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14□□□□□ -0.17
SATB2Q9UPW6 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14□□□□□ -0.17
SATB2Q9UPW6 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14□□□□□ -0.17
SATB2Q9UPW6 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SATB2Q9UPW6 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms