Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 RPF1-202ENST00000370656 724 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 BRWD1P1-201ENST00000401091 371 ntBASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 HNRNPA1P27-201ENST00000412087 955 ntBASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 AL354877.1-201ENST00000424412 413 ntBASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 GAS5-209ENST00000430245 723 ntTSL 3 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 HIST2H2BB-201ENST00000449108 381 ntBASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 AC106794.1-201ENST00000506935 792 ntBASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 NOP2-220ENST00000545915 630 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 RBM8B-201ENST00000555532 525 ntBASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 SORD2P-201ENST00000558556 1069 ntBASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 MIR4683-201ENST00000579659 81 ntBASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 NAT9-222ENST00000583476 583 ntTSL 3 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 KLK11-210ENST00000600362 759 ntTSL 3 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 MIR6720-201ENST00000611664 98 ntBASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 AC015802.1-201ENST00000588104 1449 ntBASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
LINC00474Q9P2X8 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 AC090114.2-201ENST00000608477 7054 ntBASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 AC015909.5-201ENST00000624336 2266 ntBASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms