Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
POLR2J2Q9GZM3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.2□□□□□ -0.3
POLR2J2Q9GZM3 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
POLR2J2Q9GZM3 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.2□□□□□ -0.3
POLR2J2Q9GZM3 FP325330.2-201ENST00000624219 5630 ntBASIC13.2□□□□□ -0.3
POLR2J2Q9GZM3 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.2□□□□□ -0.3
POLR2J2Q9GZM3 NCLP1-201ENST00000445357 1963 ntBASIC13.2□□□□□ -0.3
POLR2J2Q9GZM3 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.2□□□□□ -0.3
POLR2J2Q9GZM3 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.2□□□□□ -0.3
POLR2J2Q9GZM3 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
POLR2J2Q9GZM3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
POLR2J2Q9GZM3 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 AL008718.2-201ENST00000609206 1313 ntBASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 MIR1202-201ENST00000408529 83 ntBASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 HOMER2P2-201ENST00000451621 847 ntBASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 INE1-201ENST00000456273 945 ntBASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 AP000812.2-201ENST00000538934 718 ntBASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 AL355385.1-201ENST00000606123 409 ntBASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 CR392039.2-201ENST00000623182 509 ntBASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR2J2Q9GZM3 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 AC007952.5-201ENST00000572818 1486 ntBASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 AL118506.1-201ENST00000601296 3082 ntBASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 RN7SL692P-201ENST00000464677 288 ntBASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.18□□□□□ -0.3
POLR2J2Q9GZM3 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms