Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 AC025048.6-201ENST00000634326 1161 ntBASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 AL365181.3-201ENST00000605886 3222 ntBASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PHACTR1Q9C0D0 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 RPL13AP3-202ENST00000494676 1473 ntBASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 AHCYP4-201ENST00000419201 1315 ntBASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 TRIM80P-201ENST00000455685 2848 ntBASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 RN7SL837P-201ENST00000463010 287 ntBASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 RN7SL752P-201ENST00000463779 287 ntBASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 GOLGA2P8-201ENST00000505201 779 ntBASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 MIR497HG-202ENST00000572453 3838 ntBASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 AC009884.2-201ENST00000603110 324 ntBASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 AL358472.5-202ENST00000641448 1267 ntBASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.44□□□□□ -0.1
PHACTR1Q9C0D0 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PHACTR1Q9C0D0 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHACTR1Q9C0D0 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
PHACTR1Q9C0D0 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PHACTR1Q9C0D0 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PHACTR1Q9C0D0 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PHACTR1Q9C0D0 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PHACTR1Q9C0D0 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms