Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 AC021305.1-201ENST00000520656 1514 ntBASIC16.6■□□□□ 0.25
TRIM47Q96LD4 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
TRIM47Q96LD4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.59■□□□□ 0.25
TRIM47Q96LD4 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 RN7SL277P-201ENST00000481521 288 ntBASIC16.59■□□□□ 0.25
TRIM47Q96LD4 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 KRT8P28-201ENST00000433288 1390 ntBASIC16.59■□□□□ 0.25
TRIM47Q96LD4 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM47Q96LD4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.58■□□□□ 0.25
TRIM47Q96LD4 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM47Q96LD4 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.58■□□□□ 0.25
TRIM47Q96LD4 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM47Q96LD4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.58■□□□□ 0.25
TRIM47Q96LD4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.58■□□□□ 0.25
TRIM47Q96LD4 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM47Q96LD4 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM47Q96LD4 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM47Q96LD4 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM47Q96LD4 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM47Q96LD4 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.58■□□□□ 0.24
TRIM47Q96LD4 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 AL135901.1-201ENST00000451812 333 ntBASIC16.58■□□□□ 0.24
TRIM47Q96LD4 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 PEBP1P2-201ENST00000603980 558 ntBASIC16.58■□□□□ 0.24
TRIM47Q96LD4 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 AC009145.4-201ENST00000625119 1294 ntBASIC16.58■□□□□ 0.24
TRIM47Q96LD4 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM47Q96LD4 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TRIM47Q96LD4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms