Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS3Q8IXF0 RN7SL832P-201ENST00000607781 1756 ntBASIC14.59□□□□□ -0.07
NPAS3Q8IXF0 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.59□□□□□ -0.07
NPAS3Q8IXF0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NPAS3Q8IXF0 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS3Q8IXF0 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.59□□□□□ -0.07
NPAS3Q8IXF0 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS3Q8IXF0 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.59□□□□□ -0.07
NPAS3Q8IXF0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS3Q8IXF0 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.58□□□□□ -0.07
NPAS3Q8IXF0 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPAS3Q8IXF0 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.58□□□□□ -0.07
NPAS3Q8IXF0 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPAS3Q8IXF0 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPAS3Q8IXF0 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
NPAS3Q8IXF0 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.58□□□□□ -0.07
NPAS3Q8IXF0 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPAS3Q8IXF0 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 SERF2-206ENST00000409291 807 ntTSL 3 BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 TPT1P11-201ENST00000458482 498 ntBASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 AC093300.1-201ENST00000510368 1201 ntBASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 AC117503.4-201ENST00000623229 1418 ntBASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS3Q8IXF0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 AC004554.1-201ENST00000422830 1468 ntBASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 AC073210.1-201ENST00000414799 232 ntBASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 KRT18P15-201ENST00000458108 1291 ntBASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 DLK1-205ENST00000556051 469 ntTSL 2 BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 CES1P2-201ENST00000566467 1242 ntBASIC14.57□□□□□ -0.08
NPAS3Q8IXF0 RPS5-204ENST00000598098 536 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms