Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 BOLA2P3-201ENST00000404566 256 ntBASIC13.26□□□□□ -0.29
REEP3Q6NUK4 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.26□□□□□ -0.29
REEP3Q6NUK4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 NME2P1-201ENST00000426182 414 ntBASIC13.26□□□□□ -0.29
REEP3Q6NUK4 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 KRT17P7-201ENST00000451704 1104 ntBASIC13.26□□□□□ -0.29
REEP3Q6NUK4 KLF2P4-201ENST00000451959 1225 ntBASIC13.26□□□□□ -0.29
REEP3Q6NUK4 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 COL6A4P2-202ENST00000504443 2753 ntBASIC13.26□□□□□ -0.29
REEP3Q6NUK4 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.26□□□□□ -0.29
REEP3Q6NUK4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 CYP4F23P-201ENST00000593402 1579 ntBASIC13.26□□□□□ -0.29
REEP3Q6NUK4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.26□□□□□ -0.29
REEP3Q6NUK4 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 SALL4P6-201ENST00000429385 1691 ntBASIC13.25□□□□□ -0.29
REEP3Q6NUK4 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 AC005562.1-201ENST00000583030 3219 ntBASIC13.25□□□□□ -0.29
REEP3Q6NUK4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 AL354877.1-201ENST00000424412 413 ntBASIC13.25□□□□□ -0.29
REEP3Q6NUK4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 HMGN1P19-201ENST00000436976 333 ntBASIC13.25□□□□□ -0.29
REEP3Q6NUK4 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 CROCCP4-201ENST00000457096 498 ntBASIC13.25□□□□□ -0.29
REEP3Q6NUK4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms