Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 AC145098.2-201ENST00000623593 3026 ntBASIC13.39□□□□□ -0.27
LPCAT4Q643R3 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 AC004461.1-201ENST00000412461 403 ntBASIC13.39□□□□□ -0.27
LPCAT4Q643R3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 FAM86LP-201ENST00000478302 853 ntBASIC13.39□□□□□ -0.27
LPCAT4Q643R3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 AC092337.1-201ENST00000568699 1129 ntBASIC13.39□□□□□ -0.27
LPCAT4Q643R3 BX088702.1-201ENST00000610784 235 ntBASIC13.39□□□□□ -0.27
LPCAT4Q643R3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 PPP1R26P2-201ENST00000611403 3595 ntBASIC13.39□□□□□ -0.27
LPCAT4Q643R3 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 AC092053.3-201ENST00000641308 4975 ntBASIC13.39□□□□□ -0.27
LPCAT4Q643R3 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.39□□□□□ -0.27
LPCAT4Q643R3 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 AC061965.1-201ENST00000560524 1465 ntBASIC13.38□□□□□ -0.27
LPCAT4Q643R3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 KLF2P2-201ENST00000416807 1039 ntBASIC13.38□□□□□ -0.27
LPCAT4Q643R3 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 MEIS3P1-201ENST00000495167 958 ntBASIC13.38□□□□□ -0.27
LPCAT4Q643R3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 AC092865.5-201ENST00000545435 363 ntBASIC13.38□□□□□ -0.27
LPCAT4Q643R3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.38□□□□□ -0.27
LPCAT4Q643R3 AC138696.2-201ENST00000607376 223 ntBASIC13.38□□□□□ -0.27
LPCAT4Q643R3 AL662799.1-202ENST00000614205 422 ntBASIC13.38□□□□□ -0.27
LPCAT4Q643R3 SPDYE12P-201ENST00000618416 771 ntBASIC13.38□□□□□ -0.27
LPCAT4Q643R3 AC009093.7-201ENST00000623853 1223 ntBASIC13.38□□□□□ -0.27
LPCAT4Q643R3 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.38□□□□□ -0.27
LPCAT4Q643R3 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 431.6 ms