Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 HSD3BP1-201ENST00000286193 1111 ntBASIC17.42■□□□□ 0.38
RC3H1Q5TC82 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 AL121949.3-201ENST00000406684 385 ntBASIC17.42■□□□□ 0.38
RC3H1Q5TC82 MED15P3-201ENST00000413613 326 ntBASIC17.42■□□□□ 0.38
RC3H1Q5TC82 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 AC005077.3-201ENST00000449614 213 ntBASIC17.42■□□□□ 0.38
RC3H1Q5TC82 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 MTHFD2P7-201ENST00000483867 983 ntBASIC17.42■□□□□ 0.38
RC3H1Q5TC82 AC093700.1-201ENST00000503348 717 ntBASIC17.42■□□□□ 0.38
RC3H1Q5TC82 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 AP003040.1-201ENST00000532044 1024 ntBASIC17.42■□□□□ 0.38
RC3H1Q5TC82 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 BX322562.1-201ENST00000617004 561 ntBASIC17.42■□□□□ 0.38
RC3H1Q5TC82 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC17.42■□□□□ 0.38
RC3H1Q5TC82 HSPA7-201ENST00000445535 1927 ntBASIC17.42■□□□□ 0.38
RC3H1Q5TC82 STK16-202ENST00000409260 1493 ntTSL 5 BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 AC020910.6-201ENST00000623084 1459 ntBASIC17.42■□□□□ 0.38
RC3H1Q5TC82 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC17.42■□□□□ 0.38
RC3H1Q5TC82 AL050341.2-201ENST00000567508 1541 ntBASIC17.42■□□□□ 0.38
RC3H1Q5TC82 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 RHOQP2-201ENST00000449922 579 ntBASIC17.41■□□□□ 0.38
RC3H1Q5TC82 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 AP001462.1-201ENST00000594089 452 ntBASIC17.41■□□□□ 0.38
RC3H1Q5TC82 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 AC061965.1-201ENST00000560524 1465 ntBASIC17.41■□□□□ 0.38
RC3H1Q5TC82 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 TUBB4AP1-201ENST00000450755 1325 ntBASIC17.41■□□□□ 0.38
RC3H1Q5TC82 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RC3H1Q5TC82 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 AC011477.7-201ENST00000617163 1440 ntBASIC17.4■□□□□ 0.38
RC3H1Q5TC82 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 AC008741.2-201ENST00000612792 3115 ntBASIC17.4■□□□□ 0.38
RC3H1Q5TC82 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 TPT1P6-201ENST00000458298 514 ntBASIC17.4■□□□□ 0.38
RC3H1Q5TC82 SNORA47-201ENST00000458862 138 ntBASIC17.4■□□□□ 0.38
RC3H1Q5TC82 AC026412.1-206ENST00000502273 206 ntBASIC17.4■□□□□ 0.38
RC3H1Q5TC82 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC17.4■□□□□ 0.38
RC3H1Q5TC82 AC009041.4-201ENST00000620075 638 ntBASIC17.4■□□□□ 0.38
RC3H1Q5TC82 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms