Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 AC026410.1-201ENST00000507366 1101 ntBASIC16.95■□□□□ 0.3
RFX7Q2KHR2 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 OR5BD1P-201ENST00000532527 817 ntBASIC16.95■□□□□ 0.3
RFX7Q2KHR2 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 AC140113.1-201ENST00000603467 169 ntBASIC16.95■□□□□ 0.3
RFX7Q2KHR2 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 AL132780.4-201ENST00000624870 1135 ntBASIC16.95■□□□□ 0.3
RFX7Q2KHR2 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 AC073548.1-201ENST00000624088 1882 ntBASIC16.95■□□□□ 0.3
RFX7Q2KHR2 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RFX7Q2KHR2 LINC02486-201ENST00000604157 3000 ntBASIC16.95■□□□□ 0.3
RFX7Q2KHR2 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 RNVU1-8-201ENST00000364272 125 ntBASIC16.94■□□□□ 0.3
RFX7Q2KHR2 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 AC092638.2-201ENST00000441105 947 ntBASIC16.94■□□□□ 0.3
RFX7Q2KHR2 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 AC007250.1-201ENST00000608934 338 ntBASIC16.94■□□□□ 0.3
RFX7Q2KHR2 AC009084.3-201ENST00000623356 437 ntBASIC16.94■□□□□ 0.3
RFX7Q2KHR2 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 AC005840.4-201ENST00000541242 2494 ntBASIC16.94■□□□□ 0.3
RFX7Q2KHR2 HADH-202ENST00000403312 1752 ntTSL 5 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 TEKT4P2-202ENST00000559466 1312 ntBASIC16.94■□□□□ 0.3
RFX7Q2KHR2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX7Q2KHR2 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX7Q2KHR2 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RFX7Q2KHR2 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RFX7Q2KHR2 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
RFX7Q2KHR2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX7Q2KHR2 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX7Q2KHR2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX7Q2KHR2 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.93■□□□□ 0.3
RFX7Q2KHR2 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX7Q2KHR2 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX7Q2KHR2 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
RFX7Q2KHR2 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
RFX7Q2KHR2 AC097065.1-201ENST00000425737 517 ntBASIC16.93■□□□□ 0.3
RFX7Q2KHR2 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC16.93■□□□□ 0.3
RFX7Q2KHR2 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC16.93■□□□□ 0.3
RFX7Q2KHR2 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC16.93■□□□□ 0.3
RFX7Q2KHR2 RN7SL564P-201ENST00000496309 250 ntBASIC16.93■□□□□ 0.3
RFX7Q2KHR2 LINC00634-202ENST00000505157 222 ntBASIC16.93■□□□□ 0.3
RFX7Q2KHR2 IGHV1-12-201ENST00000518307 205 ntBASIC16.93■□□□□ 0.3
RFX7Q2KHR2 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFX7Q2KHR2 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
RFX7Q2KHR2 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX7Q2KHR2 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.93■□□□□ 0.3
RFX7Q2KHR2 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms